Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa2g04213 | ATGGAGTGGGTTGTCGGCGGCAAGTTTAAGATCGGTCGCAAAATCGGAAGTGGTTCGTTTGGTGAAATTTTTATCGCTTCGGATATGGATAACTCTGAGATCGTAGCTGTTAAACTGGAAAAGAAGAATACAAGGCATCCACAACTATTGCAAGAGGCCAAATTATACAGTATTCTTCAAGGAGAAAGTGGTATTCCAAATATGAAATGGTGTGGCACTGATGGAGACCATAATGTTCTGGTTATGGATCTTCTCGGGCGTAGTCTGGAAGACCTTTTTGTATTCTGTGGGAACAAACTTTCTTTAAAAGCAGTTTTGATGTTAGCCGATCAGATGCTTTCGAGAATAGAATATGTGCATTCCAAGGGATTCTTACATAGAGACATCAAACCGGATAACTTCCTAATGGGTATTAGGAGAAAATCAAATCAGGTTTATATTATTGATTTCGGACTAGCAAAAAGATATCAGGACCCCAAAACAAAGAAGCATATTGCTTACAGAGAGAAGAAAAATTTAACAGGGACTGCACGATATGCAAGTTGCAATACTCACTTAGGAATTGAGCAAAGTCGCCGGTGA | 582 | 0.3952 | MEWVVGGKFKIGRKIGSGSFGEIFIASDMDNSEIVAVKLEKKNTRHPQLLQEAKLYSILQGESGIPNMKWCGTDGDHNVLVMDLLGRSLEDLFVFCGNKLSLKAVLMLADQMLSRIEYVHSKGFLHRDIKPDNFLMGIRRKSNQVYIIDFGLAKRYQDPKTKKHIAYREKKNLTGTARYASCNTHLGIEQSRR | 193 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa2g04213 | 193 | SMART | serkin_6 | 9 | 193 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa2g04213 | 193 | SUPERFAMILY | Protein kinase-like (PK-like) | 5 | 193 | IPR011009 | - | |
Vifa2g04213 | 193 | Pfam | Protein kinase domain | 10 | 181 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa2g04213 | 193 | ProSitePatterns | Protein kinases ATP-binding region signature. | 15 | 38 | IPR017441 | GO:0005524 | |
Vifa2g04213 | 193 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 193 | - | - | |
Vifa2g04213 | 193 | CDD | STKc_CK1 | 8 | 193 | - | - | |
Vifa2g04213 | 193 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 124 | 136 | IPR008271 | GO:0004672|GO:0006468 | |
Vifa2g04213 | 193 | PANTHER | CASEIN KINASE-RELATED | 9 | 193 | - | - | |
Vifa2g04213 | 193 | ProSiteProfiles | Protein kinase domain profile. | 9 | 193 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa2g04213 | Vifa-Chr2 | 1237021938 | 1237024253 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa2g04213 | 5 | 153 | EF-hand Containing Proteins | AT1G74740 | 28.387 | 1.06e-13 | 67.0 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CK1_CK1 | Vifa2g04213 | Pkinase | 3e-26 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa2g04213 | K08960 | - | gmx:100810377 | 336.65 |