Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04200 ATGAAAAGCCATCAACCAAAACACCTTAAAACCCAACTTTTCTCATGCGGCTTCTTTCGACAGTGTGGCCAAACAGTCCTTAGTCCCACCGCCACAGGAACCACCCCACCACCGCCGCCACCACCACAACTTCCTCTCACTCACACTCACACCTCAACAACATGCGAATCTTCAACTTCCTCTTCTTCTAACTCTGCCACTTCCCAAAGCTTCACACAATGGAGATTCTCTCTTCCAACTCCCACACCCCCACCTACACCAAACACCCCCCCTCCCGCTACTATGACTCATCACCTTCCTTTCCTTTCCACCATTCCCAACCTCCAAGAACTCTTCCATGTCTCCGACCTACAACTCACCACTGACCTCAACGCTGCACTTCACCTTCTAGAACGGTCCCTCGTTCCCAACCCGCCTCAAGAACAACCACCGTGTCCTCCCAATCTCATGCGCGCGCTGATCCATAATCTACGCGAGTCCAAACCCGCCACCAAGATTCTCTTCGCGCTTTGTCTCTCGGAAGCCAACCGTCGTGTCGCGGTTGAAGCCGGCGCCGTAGGCGCCGTCGTGGAGTCTGCTCCGGAGCTAGAAGGTCCTCCCGCGGAGAGAGCTCTCGCTGCGCTGGAACTCATGTGCACGGTGCCGGAGGGTGCGGAGGAGGTGAGAGCTCACGCGCTGGCGGTACCGGTTATGGTTACTGTAATGGGAAAAACGGGGGCGCGTGGGAAGGAGTATGCTATTGGAGTATTGGCTGTGATTTATGGCGGTGATATGGCGGATCAACAGACGGCACCGCCTGAGGAAGTGGCGCGTGCGGTGGAGTTGGCACTTCAAGGAGAGTGTAGCGCTAGAGGAAAGAGAAAAGGGGGACAGCTTTTAAAGACACTGCAACAGCTCTCTAACCCCCACTCGCATGACACAAGTTGA 927 0.5534 MKSHQPKHLKTQLFSCGFFRQCGQTVLSPTATGTTPPPPPPPQLPLTHTHTSTTCESSTSSSSNSATSQSFTQWRFSLPTPTPPPTPNTPPPATMTHHLPFLSTIPNLQELFHVSDLQLTTDLNAALHLLERSLVPNPPQEQPPCPPNLMRALIHNLRESKPATKILFALCLSEANRRVAVEAGAVGAVVESAPELEGPPAERALAALELMCTVPEGAEEVRAHALAVPVMVTVMGKTGARGKEYAIGVLAVIYGGDMADQQTAPPEEVARAVELALQGECSARGKRKGGQLLKTLQQLSNPHSHDTS 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04200 308 SUPERFAMILY ARM repeat 126 254 IPR016024 -
Vifa2g04200 308 Gene3D - 102 305 IPR011989 -
Vifa2g04200 308 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 305 - -
Vifa2g04200 308 MobiDBLite consensus disorder prediction 47 77 - -
Vifa2g04200 308 MobiDBLite consensus disorder prediction 27 98 - -
Vifa2g04200 308 MobiDBLite consensus disorder prediction 78 94 - -
Vifa2g04200 308 MobiDBLite consensus disorder prediction 32 46 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g04200 148 306 U-box Gene Family AT1G49780 34.146 3.98e-19 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04200 - - gmx:100814020 298.13