Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa2g04143 | ATGTGGTTGCCAAAGAATCAATCAGATAAGAAGGATGGTGTAAATGGATTAATAGCAGTGGCAATAGACAAAGAAAAGGGGAGCCAAAATGCACTCAAATGGGCTATCGACAATCTCCTCGCAAGAAACGCGACCGTAATTCTCATCCATGTCAAGGTTTTGGTGGCTTCTCTTTCTTCAACGCCTTCGATTTTCACCACAAGCAAATCTACAAGGGGCGCGGTAAACGCTAATGGTAACGACACAATAAGCAAAGAACGAGACGCTCAAAAAAACATTTTCCTCCCATATCGCGTCTTCTGTACACGCAAAGATATACAATGCAAGGATGTTCTACTAGAAGATTCAGATGTAGCAAAAGCATTGATTGATTATGCTTCTCAGGCAGGAATCGAGCATCTGGTTCTTGGATCTTCGACAAAAGCCGGTTTGCTCAAAAGATTCAAGGTATCAGATGTTTCGGGAACAGTGGCAAAAGGTGCACCGGATTTCTGTACAGTCTATGTCATTGGAAAAGGAAAGATTCAATCAATGCGATCTGCTTCTCGTCCTGCTCCAAGCATTTCCCCTCTACATGTTAATGAAACTACTATACAAGACCAACCAGACACCAATGTTGCGTCGGAACAAAGTGCAAGAGAACAAGAAAGGAATTCTTTCGATGCTTCGCAGGATGGAATCGATTCATTCAGGTCACCATTCACCAGGAAAGGTTACAATACCAAACAATACATGGAAAATTCGATGGTAGATGGTGATATATCCTTTGTGAGTTCTGGAAGGACGAGTATCGACCGCATGTTGCCTCCATTGTATAACAGCTCGGAGATGGGCAGTAGGATGTCAATTAGCTCGGAACAAGATTTAAACTACAGCTTTGAGTCTATGTTTCAAGGAAGGAATTCTATAGATTCCAGCATTCCTGCTGAATTTACATCACTGATGTTCGATAACGAAAGGCTTTCATCTTCATCGCAAGTCGTAGATGACATGGAGGCTGAAATGAGGAGATTAAAGTTGGAGCTCAAGCAAACAATGGAAATGTACAACACAGCTTGTAAAGAAGCACTTACAGCACAACAGAAGGCAATAGAACTTCAAAAATGGAAGTTAGAAGAAGAAAGGAGATTGGAAGAGGCGAGGGTAGCCGAGGAAGCTGCGTTGGCCATCGCTAAACAGGAGAAAGAAAAATCTAAAGCAGCCATTGAAGCTGCTGAAGCGCAAAAGAGGATAGCAGAACTAGAAGCACAGAAGAGACTTCAAGCAGAAATGAAAGCTCTTAGAGAAGCAGAAGAGAAAAGAAAAGTAATGGATGCTTTGGTAAATGTAGATGTTAGATATAGAAAGTATACAATAGAGGAGATTGAAGCTGCAACTAATTTTTTCTCACAATCCCTCAAGATTGGAGAAGGAGGATATGGTCCGGTTTTTAAGTGTCTTCTGGATCATACACCCGTTGCAGTCAAGGTTCTTCGTCCTGATGCGGCACAAGGAAGGTCGCAGTTTCAACGAGAGGTTGAGGTATTGAGCTGCATACGGCATCCAAACATGGTTCTCCTCTTAGGAGCCTGTCCGGAATACGGCTGCCTAGTGTACGAGTACATGTCAAATGGAAGCTTGGATGATTGCCTGTTTCGTCGAGGAAACAATCCTCCGCTTTCTTGGCAGCTAAGGTTCAAAATTGCAGCCGAAATAGGCACGGGCTTGTTGTTCCTTCACCAGACAAAACCAGAACCTATAGTCCACAGGGACTTAAAACCAGGAAACATCTTACTAGACAGAAACTTCGTATCCAAAATCAGCGACGTGGGTTTGGCAAGACTAGTTCCACCGTCCGTCGCTGACAGCGTGACGCAATACCGCTTGACAACAACAGCTGGAACATTCTGTTACATCGATCCGGAGTATCAACAGACAGGAATGTTGGGTGTGAAGTCAGATATATACTCACTTGGGATCATTTTCCTTCAAATCTTGACAGCAAGATCACCAATGGGATTAGCACATAATGCTCAAAAAGCCATTGAAAATGGAACTTTTACCGAGATGTTGGATCCTGCGATTACTGATTGGCCAATGGAGGCCGTTATGAGTTTTGCAAATATAGCAATCAACTGCGCGGAGTTAAGGCGAAAAGATAGACCTGATCTCGGTAAGGTTGTGCTACCAGAACTTGACAGATTGAGAGTACTTGCTGATAAAAGTAACCAAAATTCAACACCAAATAGTCCTAGCTCGACGAATGGTTCCCATGAGACACAAATTTCAGTGCAGCTGGATGGAAGCTGTCCTCTATCTCCTCACTCGGATGAGGTTCGAAGAAACATAACAGTTGGTCTTTGA | 2343 | 0.4319 | MWLPKNQSDKKDGVNGLIAVAIDKEKGSQNALKWAIDNLLARNATVILIHVKVLVASLSSTPSIFTTSKSTRGAVNANGNDTISKERDAQKNIFLPYRVFCTRKDIQCKDVLLEDSDVAKALIDYASQAGIEHLVLGSSTKAGLLKRFKVSDVSGTVAKGAPDFCTVYVIGKGKIQSMRSASRPAPSISPLHVNETTIQDQPDTNVASEQSAREQERNSFDASQDGIDSFRSPFTRKGYNTKQYMENSMVDGDISFVSSGRTSIDRMLPPLYNSSEMGSRMSISSEQDLNYSFESMFQGRNSIDSSIPAEFTSLMFDNERLSSSSQVVDDMEAEMRRLKLELKQTMEMYNTACKEALTAQQKAIELQKWKLEEERRLEEARVAEEAALAIAKQEKEKSKAAIEAAEAQKRIAELEAQKRLQAEMKALREAEEKRKVMDALVNVDVRYRKYTIEEIEAATNFFSQSLKIGEGGYGPVFKCLLDHTPVAVKVLRPDAAQGRSQFQREVEVLSCIRHPNMVLLLGACPEYGCLVYEYMSNGSLDDCLFRRGNNPPLSWQLRFKIAAEIGTGLLFLHQTKPEPIVHRDLKPGNILLDRNFVSKISDVGLARLVPPSVADSVTQYRLTTTAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQILTARSPMGLAHNAQKAIENGTFTEMLDPAITDWPMEAVMSFANIAINCAELRRKDRPDLGKVVLPELDRLRVLADKSNQNSTPNSPSSTNGSHETQISVQLDGSCPLSPHSDEVRRNITVGL | 780 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa2g04143 | 780 | SMART | serkin_6 | 462 | 725 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa2g04143 | 780 | FunFam | Adenine nucleotide alpha hydrolase-like domain kinase | 434 | 534 | - | - | |
Vifa2g04143 | 780 | SUPERFAMILY | Protein kinase-like (PK-like) | 445 | 721 | IPR011009 | - | |
Vifa2g04143 | 780 | Coils | Coil | 321 | 348 | - | - | |
Vifa2g04143 | 780 | Coils | Coil | 354 | 433 | - | - | |
Vifa2g04143 | 780 | Pfam | Universal stress protein family | 18 | 162 | IPR006016 | - | |
Vifa2g04143 | 780 | Gene3D | HUPs | 17 | 171 | IPR014729 | - | |
Vifa2g04143 | 780 | ProSiteProfiles | Protein kinase domain profile. | 462 | 725 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa2g04143 | 780 | FunFam | Os07g0541700 protein | 535 | 624 | - | - | |
Vifa2g04143 | 780 | PANTHER | OS02G0152300 PROTEIN | 18 | 746 | - | - | |
Vifa2g04143 | 780 | CDD | STK_N | 17 | 173 | - | - | |
Vifa2g04143 | 780 | MobiDBLite | consensus disorder prediction | 732 | 763 | - | - | |
Vifa2g04143 | 780 | Gene3D | Phosphorylase Kinase; domain 1 | 441 | 534 | - | - | |
Vifa2g04143 | 780 | MobiDBLite | consensus disorder prediction | 180 | 213 | - | - | |
Vifa2g04143 | 780 | Gene3D | Transferase(Phosphotransferase) domain 1 | 535 | 749 | - | - | |
Vifa2g04143 | 780 | MobiDBLite | consensus disorder prediction | 732 | 780 | - | - | |
Vifa2g04143 | 780 | SUPERFAMILY | Adenine nucleotide alpha hydrolases-like | 18 | 171 | - | - | |
Vifa2g04143 | 780 | Pfam | Protein kinase domain | 464 | 715 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa2g04143 | 780 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 580 | 592 | IPR008271 | GO:0004672|GO:0006468 | |
Vifa2g04143 | 780 | MobiDBLite | consensus disorder prediction | 180 | 234 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa2g04143 | Vifa-Chr2 | 1210222054 | 1210225291 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa2g04143 | 1 | 743 | Receptor kinase-like Gene Family | AT1G78940 | 54.830 | 0.0 | 772 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-IXb | Vifa2g04143 | Pkinase | 1.6e-39 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa2g04143 | - | - | gmx:100803867 | 1047.34 |