Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04132 ATGGAGTTTGAATTGATGGAATTCCCAAACATAGAAGAAAAGAAAGCAATACTTGAAACTGCTTCGGATAGCATAAACTCTCTCAACAACTTCGTCGATTTTCTCTCTCATAAACCTTCTCATCTAAACTCCGATCTCACAAACACCACCGTCGCCAACTTCAATAAACTTTCTAGCCTATTCAACCGTACCGGCCGCGCTCGCTTCCGTCGTGCTCCCCTCCCTCAACCGCCACAGAATCTCTATCCCACTCTCGCTCCCGCTCCCTCTACCTCCACAACGCCACCTCAAGTTCAACCTCCTTCTCAGAGTCAGAACCACTCTTTAACTCTTGATTTCACTAAACCTAACATTTTCCGATCTAACCCTAAGTCCTTAGATCTAGAGTTCCATAAAGAAGCCTTCAGCGTTTCCTCTAACTCCTCATTCATGTCCTCCGCCATCACCTGTGACATCACCGGCGACGGCAGCGTTTCAAACGGTAAACAAGGTTCATCTCTCTTCCTTAACACCGTCTCCACCGCTAAACCTCCTCTCTCATCTACATCATTGAAGAACAAATGCCACCACGAACACTCCGACGACTTCTCCGGCAAACGCTCCGGTTCTAATAAGTGCCACTGCATCAAGAAAAGGAAAAATCGGATGAAGAGAACGGTGAGAGTACCGGCGGTGAGTTCGAGGATTGCGGATATACCGGCGGATGAATATTCATGGAGGAAGTATGGTCAGAAGCCGATAAAGGGATCATCTTATCCAAGGGGTTATTATAGGTGCAGTACAGTGAAAGAGTGTCCTGCGAGGAAAAAGGTGGAGCGAGCGATGGATGATCCAACGATGCTGATTGTAACGTATGAGGAGGAGCATCGTCATGAGATTCATAGTGCGATGCAGGAGAATATTTCCGGGAGTATGAGTTTGGTGGTGTTTGAGTCAACTTTAGGTGGGAATTAG 954 0.4696 MEFELMEFPNIEEKKAILETASDSINSLNNFVDFLSHKPSHLNSDLTNTTVANFNKLSSLFNRTGRARFRRAPLPQPPQNLYPTLAPAPSTSTTPPQVQPPSQSQNHSLTLDFTKPNIFRSNPKSLDLEFHKEAFSVSSNSSFMSSAITCDITGDGSVSNGKQGSSLFLNTVSTAKPPLSSTSLKNKCHHEHSDDFSGKRSGSNKCHCIKKRKNRMKRTVRVPAVSSRIADIPADEYSWRKYGQKPIKGSSYPRGYYRCSTVKECPARKKVERAMDDPTMLIVTYEEEHRHEIHSAMQENISGSMSLVVFESTLGGN 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04132 317 FunFam WRKY transcription factor 65 217 294 - -
Vifa2g04132 317 MobiDBLite consensus disorder prediction 70 109 - -
Vifa2g04132 317 SUPERFAMILY WRKY DNA-binding domain 231 293 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vifa2g04132 317 Pfam WRKY DNA -binding domain 235 292 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vifa2g04132 317 Pfam Plant zinc cluster domain 185 231 IPR018872 -
Vifa2g04132 317 SMART WRKY_cls 233 293 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vifa2g04132 317 Gene3D WRKY domain 217 293 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vifa2g04132 317 ProSiteProfiles WRKY domain profile. 228 294 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vifa2g04132 317 MobiDBLite consensus disorder prediction 76 96 - -
Vifa2g04132 317 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 17 295 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04132 Vifa-Chr2 1207316398 1207318049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g04132 1 312 WRKY Transcription Factor Family AT2G24570 53.030 1.86e-96 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vifa2g04132 WRKY 7.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04132 - - gmx:100127394 370.163