Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04053 ATGACTTTGATTTGCGGTCTCCTCGGCCTTCCTCCTTCAAATGGAGTCCTTCCACAGTCCCCCATGCACACAAAGAGTTTGGCAGTTCTTAGGAGACAGCTGATCCGAAAGAAGGTTGTGAAAAGTGCCAAGGAATGCATGGAACAACACAGTACCAGCTCTGAGTTATACGGGAAAATGCAAGCTGTGTTTGTTGAAATGGATACATCCCCTGGTGTTAAAGAATTGGAGACTTTGAAAGAAGCTGTAATGAAATCTGATACCAAGGCTGGTGCAATGGAACCTTTTGATCCTGAGAAATACATAGACGCTAATTTACCGGTCCGGGTTAATGAACAAAGAATGACCAACTTATTGCAGTCCCTCCTGGTTGGCCTATCAATAATAGGCATCTCCGTTATCAAGAAGATACCAACTTCGGTTTTATGGGGTTATTTTGCTTACATGGCAATTGATAGTCTTCCAGGGAACCAGTTTTGGGAAAGGTTATTGCTCCTCTTCATCGCCCCAAGCCGACGTTACAAAATTTTGCAAGAATCACACGCCTCGTTTGTGGAGACAGTACCATTCAAAACCATAGCTGGATTTACAGCCTTACAGTTGGCATATTTTCTGTTCTGTTTTGGGGTCACATGGATACCTGTTGGTGGGATATTGTTTCCGCTACCGTTCTTCCTTCTTATAGTTCTAAGAGAACACGTTCTACCAAACCTATTCAATCATAACGATCTTCAGGAACTAGATGCTTCTGAATACGAGGAAGTTATCGGCGCCCCACGTGGAGTACGTAGTATGTCACTAAAGGATAACGAGCCATGTGGTAGTGATACCGAAGGCAGCTCGGAAGATTACTATGATGCAGAGATATTGGATGAGATGACAACCAGCAGGGGAGAGTTGAAACTTAGAGCTGTAAGCTTCAACGATCGAAACCGCAGTAACAGCTTCAACGATCGAAACCAAAGCAACAGCTTCAATGAAGGCAGACACATTTAG 996 0.4388 MTLICGLLGLPPSNGVLPQSPMHTKSLAVLRRQLIRKKVVKSAKECMEQHSTSSELYGKMQAVFVEMDTSPGVKELETLKEAVMKSDTKAGAMEPFDPEKYIDANLPVRVNEQRMTNLLQSLLVGLSIIGISVIKKIPTSVLWGYFAYMAIDSLPGNQFWERLLLLFIAPSRRYKILQESHASFVETVPFKTIAGFTALQLAYFLFCFGVTWIPVGGILFPLPFFLLIVLREHVLPNLFNHNDLQELDASEYEEVIGAPRGVRSMSLKDNEPCGSDTEGSSEDYYDAEILDEMTTSRGELKLRAVSFNDRNRSNSFNDRNQSNSFNEGRHI 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04053 331 PANTHER ANION EXCHANGE PROTEIN 1 255 IPR003020 GO:0005452|GO:0006820|GO:0016020
Vifa2g04053 331 Pfam HCO3- transporter family 108 198 IPR011531 GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04053 Vifa-Chr2 1188588109 1188589653 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g04053 1 324 Antiporters AT4G32510 61.607 3.81e-141 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04053 K24194 - gmx:100787412 484.182