Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04044 ATGTCGAATCACTGTTTATCAAGTGCTCATTTCCTCACTATCGGAGCAACCCGCTCCCTTCCCTTGCAACGAAAACCACTTCTCTTCTCCCTCACTCTCTCTTCTCGCTCTCACAACCTCCACTCCTCAATCGTCGCCGTCTCTTCCAAAAACAAAAACAAGGAAAAAATTACTCATGTTACAGAGGGGGACGAAGAGGAGGATGCATTTGAAATGCTGTTTAAGCAACTTGAAGAAGATCTCAAAAACGATGACGATAGCGTCGATGAAACATCGGAAGAGGATATGGCTTTGTTTGAACGTGAGTTGCAAGGTGTGTTAGGTGATTTTGATGATGCTGAAAAAACCGGCAAGGGTGGAAATGATAACTCGTTGAACCTTAGAACTTGGCAATTGAATAAATTGGCTAGAGCCTTAAAAGCTGGACGCCGCAAAACAAGTATAAAAACTCTTGCTGCTGAGCTCTGTCTTGATAGATTTCTTGTTCTTAATTTGCTTCGTAACCCTCCTCCAAATCTTCTGATGATGAGCTTATCGATACCTGATGAACCCACACCATCAGCAATATCTACACCAGGAGAGAATTTTTATCAAGAAACAAGTGCAGATCATGCAGAATCTGGACCCAAGTCTAACTTACCTATTCATACCATGCAAGAGAATTGGTCTTCTCGAAAGCGATTGAAAAAGGCTCACCTTGACACTCTAGAGAGAGTTTACACGAGATCAAAGCGGCCCACTAATGCAATGATTTGTAATATTGTGCATGTTACAAACCTTCCGCGGAAAAAAATTGTTAAGTGGTTTGAAGACAAACGCGCCGAGGACGGAGTTCCAGAACAGCGCCTTCCTTATCATCACTCAGCTAATGAAACTGATTGA 882 0.4252 MSNHCLSSAHFLTIGATRSLPLQRKPLLFSLTLSSRSHNLHSSIVAVSSKNKNKEKITHVTEGDEEEDAFEMLFKQLEEDLKNDDDSVDETSEEDMALFERELQGVLGDFDDAEKTGKGGNDNSLNLRTWQLNKLARALKAGRRKTSIKTLAAELCLDRFLVLNLLRNPPPNLLMMSLSIPDEPTPSAISTPGENFYQETSADHAESGPKSNLPIHTMQENWSSRKRLKKAHLDTLERVYTRSKRPTNAMICNIVHVTNLPRKKIVKWFEDKRAEDGVPEQRLPYHHSANETD 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04044 293 Gene3D - 220 282 - -
Vifa2g04044 293 SMART HOX_1 221 283 IPR001356 GO:0003677
Vifa2g04044 293 Coils Coil 74 94 - -
Vifa2g04044 293 CDD homeodomain 222 274 IPR001356 GO:0003677
Vifa2g04044 293 ProSiteProfiles 'Homeobox' domain profile. 219 279 IPR001356 GO:0003677
Vifa2g04044 293 PANTHER ZINC-FINGERS AND HOMEOBOXES RELATED 41 286 - -
Vifa2g04044 293 Pfam Homeodomain 224 274 IPR001356 GO:0003677
Vifa2g04044 293 SUPERFAMILY Homeodomain-like 221 288 IPR009057 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Vifa2g04044 Homeodomain 2.4e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04044 - - gmx:100784216 337.806