Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04035 ATGTCGGTAGCATCGTGGTCATCATCGTCATCTCGTGTTTTTGACACCATAAATGAATGTCTCACCCTTGCAAGATCAGATTCTCATGAAGCTCAGGAGAAAGGTCTTCAAACATTGGCTGCCATCACCAAGGTAAGTCCCCAAAACAGAACCTTGGTAGCTCAAACAGATGGAGCAATCCCAACTTTAGCCACACTCACAAATGCTTCCTCCTCTATTATCCAAAGCCTTTCCTTGTTGATTCTCTTTAACCTTTCCCTCAACCCTGATTTAAAGCAATCTCTAGCAGACATGGAAACAATTTACCACCTCAATTCTCTCATTAATTCATCATCATCATCCTCGCGTTCCCTTGATTCATGTAAACTCGCCTCTTCATTGATTTGTAGCTTAGCCATGTTTGACAAAAACAAAGCCAAATTCGGAGTAGCAGGAACTGTTCTGCTGTTAGTAAATGCTATTGAAGACTCTCTTATTGATTCCACTGACGCTCATCATTTTTTAACTTCTTTAGCTGAACTTGTCCAATTCCATGGAAATTGCACTTTAGCTGTTCGAGGTGGAGCAGTTCCGGTTCTGCTTCAAGTAGTAAAGAGCACTGATAATATCAACGAGGATTTGGCTGGAACATCTCTTATCGTTCTCGGCCTCCTTATGAGGTTTGGTGAAGGGTTGAATGCAGTGAAGAAAACAAATGAGATAATAAGTTCCATGTTAAGTGTGTTGAAAGGAAGGTCCTTGTTGTGTAAAGAAGGTGCAGTTGATATTCTTGTTAGACTTTTTGATGAGAGTGATGAATGTGTTAAAGAGGCTTTGATGTTATCAGAATTTTCAAGTGTGTTGGCTGATCTTTCTGTGAGGGGTTCGGCTAGAGTGAGAGATAAGGCAGAGTTGTTAATGAGGAAGATTGCAAAGATGAGTTTAGAGACTAACATGGAATTAGTTTGCTCCCTATATGATTAA 963 0.4029 MSVASWSSSSSRVFDTINECLTLARSDSHEAQEKGLQTLAAITKVSPQNRTLVAQTDGAIPTLATLTNASSSIIQSLSLLILFNLSLNPDLKQSLADMETIYHLNSLINSSSSSSRSLDSCKLASSLICSLAMFDKNKAKFGVAGTVLLLVNAIEDSLIDSTDAHHFLTSLAELVQFHGNCTLAVRGGAVPVLLQVVKSTDNINEDLAGTSLIVLGLLMRFGEGLNAVKKTNEIISSMLSVLKGRSLLCKEGAVDILVRLFDESDECVKEALMLSEFSSVLADLSVRGSARVRDKAELLMRKIAKMSLETNMELVCSLYD 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04035 320 SUPERFAMILY ARM repeat 16 311 IPR016024 -
Vifa2g04035 320 PANTHER U BOX DOMAIN-CONTAINING 18 301 - -
Vifa2g04035 320 Gene3D - 118 315 IPR011989 -
Vifa2g04035 320 Gene3D - 15 117 IPR011989 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g04035 42 307 U-box Gene Family AT3G46510 26.217 2.91e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04035 - - gmx:121174819 405.216