Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04021 ATGGAAGGAGATAAATCTTGTTCAAGTTTGTTTCAAAGGTGCAAGCCATACATAGCTATGATTTGTCTTCAATTTGGTTTTGCTGGTATGAATATAATAACAAAAGTATCGCTCAACCGAGGAATGAGTCACTATGTTCTTGTTGTTTATAGACATGCTTTTGCTACAGCAGCTATTGCTCCATTCGCTATAGTTCTTGAGAGGAAGATAAGGCCAAGGATTACGTTTCTTATGTTCATGCAAATGTTTGTATTGGGACTCCTCGGGCCTGTGATTGATCAGAATCTATACTATGCTGGGTTGAAATTCACATCTCCAACATACTCTTGTGCTATTAGCAATATTCTCCCTGCAATGATTTTTTGTAATGGCTGTTATTTTCAGATTAAAGGTTCAATCCTTCTCATAATTGCTACCTTTGCTTGGTCTTCTTTCTTCATCCTCCAGGCAGTGACATTAAGACAATATTCAGCACAACTTTCACTGACAGCCATAAACATTGGTTTGGACATGAATTTATTAGCTGCAGCCTATGCTGGTATAATATCATCAGGTCTTACATATTATGTACAAGGAATTGTGATGCAAAAGAAAGGACCAGTTTTTGTGACTGCTTTTAGTCCTTTGATGATGATCATTGTAGCAATCATGGCCACTTTCATCCTTGCTGAAAAATTATATCTTGGAGGTGTTATTGGAGCAATTTTGATCGTAATAGGACTTTACTCCGTTCTATGGGGCAAAAACAAAGAAAACAAAGAGATTGAAGCGGAAACAAAAACAGAAAGAACGGAGTGTTGTGTAAAAATTTGGAGGCTGGTTATGTTAAGGGGAATTGGGTCTTCTTTTAGGATGAGTGTATATATCAGTATACTGATTATTTAG 885 0.3672 MEGDKSCSSLFQRCKPYIAMICLQFGFAGMNIITKVSLNRGMSHYVLVVYRHAFATAAIAPFAIVLERKIRPRITFLMFMQMFVLGLLGPVIDQNLYYAGLKFTSPTYSCAISNILPAMIFCNGCYFQIKGSILLIIATFAWSSFFILQAVTLRQYSAQLSLTAINIGLDMNLLAAAYAGIISSGLTYYVQGIVMQKKGPVFVTAFSPLMMIIVAIMATFILAEKLYLGGVIGAILIVIGLYSVLWGKNKENKEIEAETKTERTECCVKIWRLVMLRGIGSSFRMSVYISILII 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04021 294 Pfam EamA-like transporter family 16 121 IPR000620 GO:0016020
Vifa2g04021 294 Pfam EamA-like transporter family 173 245 IPR000620 GO:0016020
Vifa2g04021 294 PANTHER WAT1-RELATED PROTEIN 129 165 IPR030184 GO:0016020|GO:0022857
Vifa2g04021 294 SUPERFAMILY Multidrug resistance efflux transporter EmrE 170 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04021 Vifa-Chr2 1179517090 1179519213 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g04021 12 267 Nodulin-like Gene Family AT2G40900 46.269 1.97e-104 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04021 - - jre:109021862 348.977