Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04010 ATGTGTTCAAGTGCGAGTAACCGTATTGTGCAGTGCTCAGTCGCAACCGCACCAGGTGGTGAAACTAATTCTCCCTCCAAATTACAACCACCGTCTTTCTCAACCGTAAACTTTCGCTCCGTCAGACCCAACGACCATGTTTCTTCCGAGGTTGCGAGTAGCAGCAGGAGAGGGCTATTATGCAGCATAGCCATGTTGCCATGTCTTCTTCCACTCACTCACATCTCTGGTTCTCTCCCAGCCAACGCCATGCCACTACCAGATACAGAAGAATATGTTCGAATTAAACAAGAGTTGAGGAAGGTATTGTCAAAGGGAAAGGCTGCAGGCGTGCTTCGTTTGGTTTTTCATGATGCTGGAACTTTTGAAATTGATGACAATACAGGTGGCATGAATGGCTCTATAGTCTACGAACTTGAAAGACCTGAAAATGCCGGTCTGACAAAATCAGTGAAGGTTCTGCAGAAAGCCAAGACTCAGATAGATGCAATCTATCCAGTATCCTGGGCGGACGTTATTGCTGTGGCTGGAGCTGAAGCAATTGAACTATGTGGAGGTCCTACTATCCAAGTTTCACTCGGCAGACAAGATTCGCTGGGGCCTGATCCTGAAGGAAAACTTCCTGAAGAAACTCTTGATGCTTCTGGTTTGAAAAGATGCTTCAAGAAAAAAGGCTTTTCAACACAAGAACTGGTAGCTTTGTCTGGAGCTCACACTCTTGGAAGTAAAGGTTTTGGAAGCCCTACATCTTTTGACAATTCATATTATAAGGTTCTGTTGGAAAATCCACCCACGGCTTCTGGCGGTTTGTCGACTATGGTTGGTCTTCCTTCAGATCATGCACTTGTTGAGGATGAAGAATGCCTCAGATGGATTAAAAAATACGCAGACAATGAGAATATGTTCTTTGAAGATTTCAAAAATGCGTATGTCAAGCTGGTGAATTCTGGTGTGAGGGTCATTAAATTTGTGTACCAAAGTGTTTAA 987 0.4417 MCSSASNRIVQCSVATAPGGETNSPSKLQPPSFSTVNFRSVRPNDHVSSEVASSSRRGLLCSIAMLPCLLPLTHISGSLPANAMPLPDTEEYVRIKQELRKVLSKGKAAGVLRLVFHDAGTFEIDDNTGGMNGSIVYELERPENAGLTKSVKVLQKAKTQIDAIYPVSWADVIAVAGAEAIELCGGPTIQVSLGRQDSLGPDPEGKLPEETLDASGLKRCFKKKGFSTQELVALSGAHTLGSKGFGSPTSFDNSYYKVLLENPPTASGGLSTMVGLPSDHALVEDEECLRWIKKYADNENMFFEDFKNAYVKLVNSGVRVIKFVYQSV 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04010 328 FunFam L-ascorbate peroxidase 98 215 - -
Vifa2g04010 328 ProSitePatterns Peroxidases active site signature. 108 119 IPR019794 GO:0004601
Vifa2g04010 328 Gene3D Peroxidase, domain 2 208 310 - -
Vifa2g04010 328 FunFam Adenylate/guanylate cyclase 208 310 - -
Vifa2g04010 328 SUPERFAMILY Heme-dependent peroxidases 98 318 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vifa2g04010 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 230 240 IPR019793 -
Vifa2g04010 328 PRINTS Plant ascorbate peroxidase signature 126 136 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vifa2g04010 328 PRINTS Plant ascorbate peroxidase signature 224 245 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vifa2g04010 328 PRINTS Plant ascorbate peroxidase signature 166 184 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vifa2g04010 328 PRINTS Plant ascorbate peroxidase signature 108 123 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vifa2g04010 328 PRINTS Plant ascorbate peroxidase signature 206 223 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vifa2g04010 328 PRINTS Plant ascorbate peroxidase signature 294 318 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vifa2g04010 328 PRINTS Plant ascorbate peroxidase signature 185 197 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vifa2g04010 328 PRINTS Haem peroxidase superfamily signature 185 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g04010 328 PRINTS Haem peroxidase superfamily signature 167 184 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g04010 328 PRINTS Haem peroxidase superfamily signature 108 122 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g04010 328 PRINTS Haem peroxidase superfamily signature 230 245 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g04010 328 Gene3D - 96 317 - -
Vifa2g04010 328 Pfam Peroxidase 97 298 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g04010 328 ProSiteProfiles Plant heme peroxidase family profile. 87 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g04010 328 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 86 320 IPR044831 GO:0004601|GO:0034599
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04010 Vifa-Chr2 1176138629 1176142451 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g04010 87 319 Peroxidase AT5G47000 29.930 6.49e-23 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04010 K00434 - gmx:100792735 459.529