Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04008 ATGAATCGGGGGATACTGCAAGATAGCTGCACAAACTCTTATGAATCAATGGTGGTGTATGCTCCTGTGGACATTACTGGAATTCAGTCTGTGATGACAGGATACGATTCGAGCAATCTTGCAATACTGCCGTCAGGATTCTCAATTGTTCCTGATGGCTTAGAGTCAAGGCCAATGGTAATTACTTCGAGGCGGGAGGAGAAAAATACAGAGGGAGGATATTTGTTTACAATAGCATTCCAGATTCTTACCAATGCTTCTCCTACAACCAAATTAACAATGAAGTCTGTGGACTCTGTTAACAATCTTGTGAAGATGGTTAGTCAAAATCAGGCAATTGATGCATAG 348 0.4138 MNRGILQDSCTNSYESMVVYAPVDITGIQSVMTGYDSSNLAILPSGFSIVPDGLESRPMVITSRREEKNTEGGYLFTIAFQILTNASPTTKLTMKSVDSVNNLVKMVSQNQAIDA 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04008 115 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 5 110 IPR042160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04008 Vifa-Chr2 1176100155 1176100502 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g04008 5 110 Homeobox Transcription Factor Family AT1G79840 61.321 1.75e-39 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04008 K09338 - gmx:100808292 171.4