Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03992 ATGGCCGTTTCATCATCTTTTTCTCTTTTCATCCTTTTTCTTGTGTTTGCTTTTGCTGCTACAGCGCCTATGGGTAAGGATTACATCGTTGGTGGCAAACCTGATGCATGGAAAGTTCCTTCTTCTGAATCTGACTCTCTCAACAAATGGGCTGAGGGAGTTCGTTTCAACGTTGAAGATCATCTTATTTTCACATATGAAGCTGGAAAAGACTCAGTTTTCGAAGTGAGCAAAGAGAATTATGTGAGCTGCAACACCTCAAGCGCGATAAAAAAGTACAACGATGGAAAAACCAAGGTGAGATTTGATTTTTCAGGTCCGTACTACTTCATCAGTGGAGAAAAGGGTCACTGTGAAAAGGGTGAGAAGGTCACTGTGGTGGTTATAAGTCAAAGAAGTATCGTATCTCCTTCACCTTCTGCTTCTCCTGCTTCGGCTCCGGTGGCTCCTGTACAAGGTCCAGCTGTTGCTCCAAAGAGCAGTGCAAATGTTTTGCAGGGTGGTGGTGTTTTGATGGCCATGGGAGTGGTGGTGGCTGCTATGTGTTTTTTCTGA 555 0.4432 MAVSSSFSLFILFLVFAFAATAPMGKDYIVGGKPDAWKVPSSESDSLNKWAEGVRFNVEDHLIFTYEAGKDSVFEVSKENYVSCNTSSAIKKYNDGKTKVRFDFSGPYYFISGEKGHCEKGEKVTVVVISQRSIVSPSPSASPASAPVAPVQGPAVAPKSSANVLQGGGVLMAMGVVVAAMCFF 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03992 184 CDD OsENODL1_like 26 129 IPR041846 -
Vifa2g03992 184 Gene3D - 25 138 IPR008972 -
Vifa2g03992 184 Pfam Plastocyanin-like domain 37 121 IPR003245 GO:0009055
Vifa2g03992 184 PANTHER BLUE COPPER PROTEIN 27 141 IPR039391 GO:0009055
Vifa2g03992 184 FunFam Early nodulin-like protein 1 25 133 - -
Vifa2g03992 184 SUPERFAMILY Cupredoxins 25 129 IPR008972 -
Vifa2g03992 184 ProSiteProfiles Phytocyanin domain profile. 26 130 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03992 Vifa-Chr2 1173892502 1173893056 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03992 8 184 Phytocyanin Superfamily AT2G25060 46.067 6.29e-51 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03992 - - gmx:100305551 162.155