Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03986 ATGTTTGCTGAAGAAAATGGTCTCAAAGGAGACCCTAGATTGCAACACATCTCTCAATCCATCAGAGTTGTTCCTCACTTCCCAAAAAATGGAATAATGTTTCAAGACATAACGACATTGTTGTTAGATCACAAGGCGTTTAAAGATACTGTCGATATTTTTGTCGATCGTTACAGAGACATGCACATTTCAGTTGTTGCTGGAATTGAAGCACGAGGTTTTGTGTTTGGTTCCTCTGTTGCGTTAGGTATTGGTGCAAAGTTTGTTCCTTTACGCAAACCTAGGAAGCTGCCGGGTGAGGTAATTTATGAAAAATATTCTCTAGAATATGGAACTGATTGTCTGGAAATGCATGTTGGGGCTGTCCAAACCGGTGAACGCGCTATAGTTATCGATGATTTGGTCGCAACTGGTGGAACTTTGTCAGCGGGAATAAGACTTTTAGAGCGTGCTGGTGCTGAAGTAGTGGAATGTGCTTGTGTTATTGGTGTGCCTGAGGTTAAGGGACGGTGCAAACTTCTTGGAAAGCCACTTTATGTCCTTGTGGAGCCACGTCAAGTAGATCAATGTTTTTGA 576 0.4219 MFAEENGLKGDPRLQHISQSIRVVPHFPKNGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMHISVVAGIEARGFVFGSSVALGIGAKFVPLRKPRKLPGEVIYEKYSLEYGTDCLEMHVGAVQTGERAIVIDDLVATGGTLSAGIRLLERAGAEVVECACVIGVPEVKGRCKLLGKPLYVLVEPRQVDQCF 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03986 191 Pfam Phosphoribosyl transferase domain 43 165 IPR000836 -
Vifa2g03986 191 SUPERFAMILY PRTase-like 19 177 IPR029057 -
Vifa2g03986 191 CDD PRTases_typeI 51 183 IPR000836 -
Vifa2g03986 191 Hamap Adenine phosphoribosyltransferase [apt]. 17 184 IPR005764 GO:0003999|GO:0005737|GO:0006168
Vifa2g03986 191 FunFam Adenine phosphoribosyltransferase 1 5 184 - -
Vifa2g03986 191 NCBIfam adenine phosphoribosyltransferase 18 182 IPR005764 GO:0003999|GO:0005737|GO:0006168
Vifa2g03986 191 Gene3D - 6 184 IPR029057 -
Vifa2g03986 191 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 9 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03986 Vifa-Chr2 1172610332 1172612118 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03986 11 183 PRT Gene Family AT1G27450 71.098 6.07e-90 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03986 K00759 - gmx:100499904 347.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03986 2 1172610332 1172612118 Vifa2g03986 2 1172610332 1172612118 ECH