Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03923 ATGGATCCTAATCATTTTCATTATCAACAAGCTATGTTCAATTACATGTCAAATTATCAAAATCCTAATCCTCAAAATTCTCAATTTCCATCTGTGCCAACAAACCCCGCCATATTTTTTCCGGAAACACCGATTGGGTTTATGTCCGGATGTCAAGTTCCACCAGTTTCTACTCAAGTTGGTACTGAAAAAGAAGAAAGGGTTGTCGTTAAAAAAAAATCTCGAGAGCAATTTACAAGGGATGAAGATATACTGCTTATCCAATCATGGCTCAATGTTTCAAAGGATCCAATTGTGGGAGTTGATCAAAAAGCTGAGAGTTTTTGGTTAAGAATCGCTGCCAATTATAACCAGTATCATGGGCAATCGTGGGAAAAGTTAGGCGGGCAATTAAAATGTCGATGGCATCGAATAAATGGCTTGGTTCAAAAATTTGTTGGGTGTTACAAACAAGTTGTTAATGGAAAAAAAAGTGGGACATCGGAGAACGATATCATGGTTGTTGCACATGCTTTTTTTGCTCAGGATGAAGGTACAACATTCAATCTTGAGTATGTATGGCGATTGTTAAAAGATGAACCTAAATGGATGGGAGAATCGATTGGAAATTCTTCAAAAATTACAAAGAGCTCTGCTAGTGGGGCATCATCGGATAACCCAAATACACCTTCAAGTTATGAGTTTAACTCATCATCACCAATGGAGCATCCAATGGGACAAAAAGCAGCAAAAAGGAAGGGTAAGGCAAAGGAAATTCCAAATGCAATGCAAGATGCAAGGATTAAAAGAGCAGCAGCAATGGAAAGACTAGCTCAATGTAAGGAGGACGAGCTAGAACTAAAGGCAATGAATATCATCATGAAAGACACTTCTACTATGAATGATAATCAACGAGATATTCATGAAAAATATTGTAATAAGATGGAAAAAAATATGGAATGTAGTTAG 948 0.3703 MDPNHFHYQQAMFNYMSNYQNPNPQNSQFPSVPTNPAIFFPETPIGFMSGCQVPPVSTQVGTEKEERVVVKKKSREQFTRDEDILLIQSWLNVSKDPIVGVDQKAESFWLRIAANYNQYHGQSWEKLGGQLKCRWHRINGLVQKFVGCYKQVVNGKKSGTSENDIMVVAHAFFAQDEGTTFNLEYVWRLLKDEPKWMGESIGNSSKITKSSASGASSDNPNTPSSYEFNSSSPMEHPMGQKAAKRKGKAKEIPNAMQDARIKRAAAMERLAQCKEDELELKAMNIIMKDTSTMNDNQRDIHEKYCNKMEKNMECS 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03923 315 Coils Coil 256 276 - -
Vifa2g03923 315 Pfam No apical meristem-associated C-terminal domain 180 298 IPR029466 -
Vifa2g03923 315 PANTHER - 60 310 - -
Vifa2g03923 315 MobiDBLite consensus disorder prediction 201 252 - -
Vifa2g03923 315 MobiDBLite consensus disorder prediction 201 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03923 Vifa-Chr2 1145109252 1145110199 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03923 71 277 Glutathione S-transferase Gene Family AT5G41240 31.839 2.74e-26 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03923 - - psat:127115199 431.409