Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03913 ATGGCTGGTTCCTCAAGAACTGTTTCTGCTTCTCTTCTGTTCATGTTCTTTCTCTTTGGCCTCTCTGCAGCTAAGGAACTATTGGTTGGAGGCAATGTTAATGCATGGAAGGTTCCATCTTCTGAAGCAGACTCACTCAATAAATGGGCTGAGAAATCTCGATTCAATGTCGGCGATCATCTTGTCTGGAAATATGATGGTGGGAAAGACTCAGTTTTGCAAGTAAGCAAAGACGATTATGCTAACTGCAACAGCTCAAACCCCATTGAAGAGTACAATGATGGGAACACTAAGGTGAAGCTAGACCGTCCTGGACCATTCTACTTCATCAGTGGAGCAAAGGGTCATTGTGAGAAGGGACAAAAGCTGGTTGTGGTGGTTATTACTCCAAGGAGAAGACACAGTGCAGTTTCCCCTGCACCTTCTCCAGCACCTTCTTCAGCAGAGTTAGAAGAAGGTCCAGCTGTTGCTCCAACTAGCAGTGCACCAGTTTTGCAAACTGGCTTTGTGACTGCTCTGGGACTGTTAGCTACTATTTCTGTTGGTTTTCTCTTGTGA 558 0.4534 MAGSSRTVSASLLFMFFLFGLSAAKELLVGGNVNAWKVPSSEADSLNKWAEKSRFNVGDHLVWKYDGGKDSVLQVSKDDYANCNSSNPIEEYNDGNTKVKLDRPGPFYFISGAKGHCEKGQKLVVVVITPRRRHSAVSPAPSPAPSSAELEEGPAVAPTSSAPVLQTGFVTALGLLATISVGFLL 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03913 185 Gene3D - 23 131 IPR008972 -
Vifa2g03913 185 FunFam Early nodulin-like protein 1 24 132 - -
Vifa2g03913 185 SUPERFAMILY Cupredoxins 24 128 IPR008972 -
Vifa2g03913 185 ProSiteProfiles Phytocyanin domain profile. 25 129 IPR003245 GO:0009055
Vifa2g03913 185 Pfam Plastocyanin-like domain 36 121 IPR003245 GO:0009055
Vifa2g03913 185 PANTHER BLUE COPPER PROTEIN 26 144 IPR039391 GO:0009055
Vifa2g03913 185 CDD OsENODL1_like 25 128 IPR041846 -
Vifa2g03913 185 MobiDBLite consensus disorder prediction 135 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03913 Vifa-Chr2 1141508044 1141508687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03913 11 183 Phytocyanin Superfamily AT2G25060 53.448 1.69e-61 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03913 - - tpra:123897354 258.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03913 2 1141508044 1141508687 Vifa2g03913 2 1141508044 1141508687 ECH
Vifa3g04605 3 1318799669 1318800319 Vifa2g03913 2 1141508044 1141508687 PCT