Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03890 ATGAGAACCATACCAACAACAACTTCAACTAGTTACTCATTTTCACCATATTCATCGCCTTCAATTATCTCTCATTCTTCATGGCACTCGCCGATTCCTTATCTATTCGGAGGCCTAGCAGCGATGCTAGGCCTCATAGCTTTCGCTCTCTTGATTTTAGCTTGCTCTTATTGGAGACTCAATAGTCAATTACAAGACGAAGAGAACAACAACAGAAACAGTGAAAAAGAAGGTGATAGTTTGAATCAAAAAACTGTTAAAGTTTATGAACAGAAATTTCTCGTCATTATGGCTGGTGATTCAAACCCTTCGTTTTTGGCTACTCCGGTTTTTCCTAAATCTTCTTCTGTAATGGATCTGAATTCCGATGAAGAGGTTCCAAATCATGAAGCGGTTGAGAAATCGGAGAAGGAAACGGAAGTTGCAGATCATCGGAATCACCAACAGTGA 450 0.3978 MRTIPTTTSTSYSFSPYSSPSIISHSSWHSPIPYLFGGLAAMLGLIAFALLILACSYWRLNSQLQDEENNNRNSEKEGDSLNQKTVKVYEQKFLVIMAGDSNPSFLATPVFPKSSSVMDLNSDEEVPNHEAVEKSEKETEVADHRNHQQ 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03890 149 Coils Coil 57 84 - -
Vifa2g03890 149 PANTHER PROTEIN GLUTAMINE DUMPER 4-RELATED 6 142 IPR040359 GO:0080143
Vifa2g03890 149 MobiDBLite consensus disorder prediction 123 149 - -
Vifa2g03890 149 MobiDBLite consensus disorder prediction 117 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03890 Vifa-Chr2 1138338585 1138339034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03890 21 115 Glutamine Dumper (GDU) Family AT4G31730 58.947 7.34e-36 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03890 - - cam:101490824 152.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03890 2 1138338585 1138339034 Vifa2g03890 2 1138338585 1138339034 ECH