Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03882 ATGTTTCATTACCCTTCTACATGGGTTGTTGCTGTTGTTTGCACTATCCTTGTCGCCGTTTCATTTGCTCTTGTACGTGGTCTTCATCATCTTGGCAAGTTTCTTAAGACGAAAAATCAAGAATCACTCTTTCAAGCCTTACAAAAAATCAAAGAAGAGTTGATGCTGTTGGGTTTTATTTCTATATTTCTGGCTCAAGCACAAAATGTGATTGTAGAAATCTGTGTTCTAGAAAAAATGATGCATCATATGCTTCCTTGTAAACTTGAAGAAAGAGAATATGAACAATCAGTTGTAAAATCAAAACCAAAACCAATCGTACATTTTCAGACTTTTTTCTCTTCCAATGATGTTTTTGGCACTGCTAGACGCCTTCTTAGTGATAATGGTAATCATCCATCACAAGAGGGACAACATGGCTACTGTGCTGCCAAGGGAAAGGTTCCTCTGTTATCATTGGAAGGACTGCATCGCCTGCATATCTTTATTTTTGTCCTAGCTATTTGTCATGTGGCCATATCTGTTTTGACTATTGTTTTTGGAGGATTAATCATTCGTAAATGGAAGCACTGGGAACACTCTATTGGTGTAGATGAAGACAATGAATCACAACATGCTTCGGAGCGGGCGGAGGAGGTGACTCATGTTCATGAGCATGAATTTATACAGTATCATGTTTTTGGTTCTGGAAAAAATTCTGCTATAACAGGATGGGTGAGATCATTTTTCAAGCAATTTTATGGATCTGTGACAAAGTTGGATTATGTAACATTAAGGCGAGGTTTCATTATGACTCATTGTAGGGGCAATCGAACGTTTAATTTTCATAAGTACATGAATCGTGCACTTGAAGAAGACTTCAAGAAAGTTGTTGGTATAAGTTGGTATCTTTGGATCTTTGTGGTCATATTTTTGTTGCTTAATATCCATGGTTGGCATGCATATTTCTGGATTGCATTCATTCCTATTATTTATCCATTTCAACGTACTAAGCTCCATCATATATGCGCTGTATACTTCGAATGGCCTTCGGAGAGAACAGATGGATATATCCTTCCATGTATAGTCGAAAGGGATTTACGACGATTTGCCAATTTGCGATCAACTTCGTCTGAACTTGGGTTGAACCTTCCTTTACATGAGGTTGGCATGCATATTTCTGGATTGCATTCATTCCTATTATTGGCTCATGCTCAGTATCCATTTCAACGTACTAAGCTCCATCATATATGCGCTGTATACTTCGAATGGCCTTCGGAGAGAACAGATGGATATATCCTTCCATGTATAGTCGAAAGGGATTTACGACGATTTGCCAATTTGCGATCAACTTCGTCTGAACTTGGGTTGAACCTTCCTTTACATGAGGGATTGGAATCACCCGCTGATGGTAGACGTTCATCTGAGTCTAGCTATCGTATTGGAGATAATGGAACTTCAGGGGGGACAAATTAG 1455 0.3876 MFHYPSTWVVAVVCTILVAVSFALVRGLHHLGKFLKTKNQESLFQALQKIKEELMLLGFISIFLAQAQNVIVEICVLEKMMHHMLPCKLEEREYEQSVVKSKPKPIVHFQTFFSSNDVFGTARRLLSDNGNHPSQEGQHGYCAAKGKVPLLSLEGLHRLHIFIFVLAICHVAISVLTIVFGGLIIRKWKHWEHSIGVDEDNESQHASERAEEVTHVHEHEFIQYHVFGSGKNSAITGWVRSFFKQFYGSVTKLDYVTLRRGFIMTHCRGNRTFNFHKYMNRALEEDFKKVVGISWYLWIFVVIFLLLNIHGWHAYFWIAFIPIIYPFQRTKLHHICAVYFEWPSERTDGYILPCIVERDLRRFANLRSTSSELGLNLPLHEVGMHISGLHSFLLLAHAQYPFQRTKLHHICAVYFEWPSERTDGYILPCIVERDLRRFANLRSTSSELGLNLPLHEGLESPADGRRSSESSYRIGDNGTSGGTN 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03882 484 PANTHER MLO-LIKE PROTEIN 1 6 337 IPR004326 GO:0006952|GO:0016020
Vifa2g03882 484 Pfam Mlo family 5 336 IPR004326 GO:0006952|GO:0016020
Vifa2g03882 484 MobiDBLite consensus disorder prediction 464 484 - -
Vifa2g03882 484 MobiDBLite consensus disorder prediction 459 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03882 Vifa-Chr2 1134531413 1134534908 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03882 4 337 MLO family AT4G02600 57.612 7.86e-124 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03882 K08472 - gmx:100811793 427.172