Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03862 ATGATGCACATGACCTTCTACTGGAGCACAAAAGCAACTCTCCTGTTCGATTCATGGAAAACCGATTCATGGACGAGTTACATCCCGAGTCTACTCGCTTGTCTCATCGTCTCCATCTTCTACCAGTTGCTCGAGAATCGCCGTATTCGCCTGAAGCTGCTGGCCTCCGGAAAGCCGTTTCCGGATCAGATCGAGGCGCCTCTTCTACGACGGACGTTCGCCGGAAGTGGAGCTAAGTTAGGCGTGAGAGTCGCCGGAGCGGTTCTGTTCGGGTTGAGCTCGGCGATCGGGTATTTCTTGATGTTGGCTGTTATGTCGTTTAACGGCGGCGTGTTTATTGCTATTGTTGTTGGTCTTGCTGTTGGTTATTTGTTGTTCAGGAGTGATGGGGAAGACTCTGTTATGGTTGATAGTTCTTGCGCATGTGCTTGA 432 0.5069 MMHMTFYWSTKATLLFDSWKTDSWTSYIPSLLACLIVSIFYQLLENRRIRLKLLASGKPFPDQIEAPLLRRTFAGSGAKLGVRVAGAVLFGLSSAIGYFLMLAVMSFNGGVFIAIVVGLAVGYLLFRSDGEDSVMVDSSCACA 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03862 143 Pfam Ctr copper transporter family 4 126 IPR007274 GO:0005375|GO:0016020|GO:0035434
Vifa2g03862 143 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 1 133 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03862 Vifa-Chr2 1126666824 1126667255 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03862 1 143 Inorganic Solute Cotransporters AT5G20650 56.000 1.93e-52 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03862 K14686 - gmx:100805457 226.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03862 2 1126666824 1126667255 Vifa4g01222 4 368837960 368838439 ECH
Vifa2g03862 2 1126666824 1126667255 Vifa2g03862 2 1126666824 1126667255 ECH