Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03798 ATGACAGATAAAAATCCATATTCACCTGAGTTAGACTTAACCAACCAGTGGCCTTTGGAGTTCTCTGAGTACTTGAAATTTGACGAAGATGAATGGCCAGATGATAATCCGGAGCCATTTATTGCCGAACATGTCACCAACCAAGACAATGAATTAGTAGCTGATTTTGGAGGAAGTGGAAGCCAGATCGAAGGACCAGCTTCGAGCAGCGAACGTGAGAAGAAGGAAGTTAAAGATAAAGTTGCATTCAAAACTAAGTCAGAGGTTGAAATTCTTGATGATGGATTCAAGTGGAGGAAGTATGGAAAGAAGATGGTCAAAAACAGCCCCAATCCAAGGAACTACTATAAATGTTCAAAAGATGGATGCCAAGTGAAGAAGAGAGTTGAGAGAGATGTGGATGATCCGAGTTATGTGATTACAACCTATGAAGGCACACATACACATCCAAGTTTTCACTAG 462 0.4069 MTDKNPYSPELDLTNQWPLEFSEYLKFDEDEWPDDNPEPFIAEHVTNQDNELVADFGGSGSQIEGPASSSEREKKEVKDKVAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKCSKDGCQVKKRVERDVDDPSYVITTYEGTHTHPSFH 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03798 153 SMART WRKY_cls 92 151 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vifa2g03798 153 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 51 150 IPR044810 GO:0003700
Vifa2g03798 153 MobiDBLite consensus disorder prediction 55 76 - -
Vifa2g03798 153 SUPERFAMILY WRKY DNA-binding domain 85 151 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vifa2g03798 153 ProSiteProfiles WRKY domain profile. 87 152 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vifa2g03798 153 Pfam WRKY DNA -binding domain 93 150 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vifa2g03798 153 Gene3D WRKY domain 79 145 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vifa2g03798 153 FunFam WRKY transcription factor 57 78 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03798 Vifa-Chr2 1113056463 1113057002 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03798 9 153 WRKY Transcription Factor Family AT5G26170 50.602 2.91e-42 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vifa2g03798 WRKY 8.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03798 - - psat:127087897 302.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03798 2 1113056463 1113057002 Vifa2g03798 2 1113056463 1113057002 ECH