Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03777 ATGGTGTTGATGGATTTGGAATGGTGGTTTTCAATTCCAATTAGTGTTTCTTTTGGTTCAACAATGTTTACCCTGTTGAGTTTAGTTGGAGGATGGTTGATTTATCTGTATGGGCCATATTGGAGAGTACGAAAGGTACCAGGCCCACCATCACTTCCGCTGGTAGGACACCTTCACTTGTTAGCAAAGCATGGTCCTGATGTTTTCTCAATACTTGCTAAGCAATATGGTCCAATCTACAGATTTCATACGGGAAGACAACCACTAATAATAGTAGCAGATGCAGAACTGTGTAAAGAAGTAGGAATCAAAAAGTTCAAAGACATTTCAAACAGAAGCACTCCTTCTCCCATTAAAGCTTCTCCACTTCACCAAAAGGGTCTCTTCTTCACCAAGGATTCACAATGGTCTACAATGAGGAACACCATTTTGTCGCTATATCAACCGTCACATCTATCAAGATTAGTGCCAACAATGCAATCATTCATAGAATCTGCCACTCTAAATCTTGACTCAGAAAATGAAGATGTTGTCTTTTCTAATTTATCGCTTAAACTCGCGACCGACGTGATTGGACAAGCGGCGTTTGGTGTCAATTTCGGTCTCTCTGAGCCTCATTCCGTTTGCAATAAAATCAAGAATGTTGGTGATAATGAAGTATCGGATTTTATCAATCAACATATATACTCGACAACTCAACTTAAGATGGATTTGTCGGGTTCGTTCTCAATCATTCTTGGTCTACTTATTCCGATTCTTCAAGAACCGTTTAGACAGGTTTTGAAGCGAATACCGGGCACTATGGACTGGAAAATCGAGCGTACTAACAGAAAACTAGGCGGACGACTTGATGAGATTGTAGAGAAGCGAATGAAAGATAGAACGCATAGTTCAAAGGATTTCTTGTCGCTTATACTAAATGCCAGAGAATCAAAAGCTGTTTCGGAGAATGTGTTCACATCTGAATATATCAGTGCTGTTACTTATGAACACTTGCTTGCTGGTTCTGCAACCACTTCCTTTACATTGTCTTCTGTTGTCTATCTGGTTGCTGCGCATCCAGAAGTCGAGAAAAAGATGCTTGAAGAGATTGATGGGTTTGGTTCAATAGATCAAATACCAACTTCTCAAGATCTTCATGACAAGTTCCCTTATCTTGATCAGGTGATCAAAGAGGCGATGAGGATTTACATTGTATCGCCGTTAGTTGCAAGAGAAACATCAAATGAAGTAGAAATCGGAGGTTACCTTCTTCCAAAGGGGACATGGGTTTGGTTAGCACTTGGAGTTCTAGCAAAAGATCCAAAAAACTTTTCAGAGCCAGAAAAGTTTAAGCCAGAAAGGTTTGATCCTAACTGTGAAGAAATGAAGAGAAGGCACCCTTATGCTTTCATACCATTCGGAATTGGTCCTCGGGCTTGCATCGGTCAGAAATTCTCCCTACAAGAGATTAAGCTTTCGCTCGTTCATTTATACAGAAAATACTTGTTTCGGCATTCACCCAACATGGAAAGCCCTTTAGAACTCGAATATGGCATAGTCCTTAACTTCAAGCATGGTGTCAAGCTCAGAGTCGTAACAAGAACAATACGGAGCTCCTAA 1602 0.4045 MVLMDLEWWFSIPISVSFGSTMFTLLSLVGGWLIYLYGPYWRVRKVPGPPSLPLVGHLHLLAKHGPDVFSILAKQYGPIYRFHTGRQPLIIVADAELCKEVGIKKFKDISNRSTPSPIKASPLHQKGLFFTKDSQWSTMRNTILSLYQPSHLSRLVPTMQSFIESATLNLDSENEDVVFSNLSLKLATDVIGQAAFGVNFGLSEPHSVCNKIKNVGDNEVSDFINQHIYSTTQLKMDLSGSFSIILGLLIPILQEPFRQVLKRIPGTMDWKIERTNRKLGGRLDEIVEKRMKDRTHSSKDFLSLILNARESKAVSENVFTSEYISAVTYEHLLAGSATTSFTLSSVVYLVAAHPEVEKKMLEEIDGFGSIDQIPTSQDLHDKFPYLDQVIKEAMRIYIVSPLVARETSNEVEIGGYLLPKGTWVWLALGVLAKDPKNFSEPEKFKPERFDPNCEEMKRRHPYAFIPFGIGPRACIGQKFSLQEIKLSLVHLYRKYLFRHSPNMESPLELEYGIVLNFKHGVKLRVVTRTIRSS 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03777 533 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 467 476 IPR017972 GO:0005506|GO:0016705
Vifa2g03777 533 Pfam Cytochrome P450 47 515 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g03777 533 PRINTS E-class P450 group I signature 427 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g03777 533 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g03777 533 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g03777 533 PRINTS E-class P450 group I signature 343 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g03777 533 PRINTS E-class P450 group I signature 474 497 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g03777 533 PRINTS E-class P450 group I signature 464 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g03777 533 PRINTS E-class P450 group I signature 387 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g03777 533 PRINTS E-class P450 group I signature 323 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g03777 533 SUPERFAMILY Cytochrome P450 40 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g03777 533 Gene3D Cytochrome P450 36 531 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g03777 533 PANTHER THROMBOXANE-A SYNTHASE 21 529 - -
Vifa2g03777 533 PRINTS P450 superfamily signature 388 399 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g03777 533 PRINTS P450 superfamily signature 465 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g03777 533 PRINTS P450 superfamily signature 334 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g03777 533 PRINTS P450 superfamily signature 474 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g03777 533 FunFam Cytochrome P450 3A4 33 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03777 Vifa-Chr2 1107202031 1107208109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03777 85 528 Cytochrome P450 AT2G26170 75.901 0.0 670
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03777 K20771 - gmx:100797803 912.524
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03777 2 1107202031 1107208109 Vifa2g03777 2 1107202031 1107208109 ECH
Vifa3g04712 3 1353963543 1353965049 Vifa2g03777 2 1107202031 1107208109 PCT