Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03773 ATGAGTGGCGAGGATGAAGAAAAAAAGTTGAAATTGAAGCGAAATTCTTCTCGGTTAAGCAATTTTCAACGCGACCTTATGGCGGGTGCGTTGATGGGTGGTGCGATTCATACGCTTGTGGCCCCGATTGAGAGGGCGAAATTGTTGTTGCAGACGCAGGAGAGTAACTTGGCTATTGTTGCTAGTGGTCGGAGAAAATTCAAAGGGATGTTTGATTGTATAATTCGGACTGTTAAGGAAGAAGGTGTTGTTTCTTTGTGGCGTGGGAATGGGAGTAGTGTTCTTCGATATTATCCTTCTGTTGCACTCAATTTCTCTCTTAAGTGTTTTTTTTTCCAACAGGATCTTTACAGAAGCATATTAAGGGGTGGGAACTCTGATGCCGATAATTTTTTCTCTGGTGCATCCGCTAATTTTGTTGCCGGATCTGCAGCAGGTTGTACATCACTTATCTTGGTATACCCCCTTGATATCGCACACACCCGCCTTGCCGCTGACATCGGGAGGACGGAAGTGCGCCAATTCCGAGGCATTTACCATTTCTTGGCCACGATATTCCAAAAAGACGGGGTTCGGGGAATTTACAGGGGCCTTCCTGCATCACTACACGGTATGGTGGTTCATAGAGGTCTTTACTTCGGAGGGTTTGATACCATAAAAGAGAAGTTGTCTGAAGAATCTAAACCTGAGTTGGTGCTGTGGAAACGTTGGATGGTAGCTCAAGCAGTTACAACCTCAGCCGGTCTGATATCATATCCGCTAGACACAGTTCGTAGGAGGATGATGATGCAGTCTGGCATGGAACATCCGGTGTACACTAGCACCCTCGACTGCTGGAGGAAAATCTATCGAACAGAGGGATTGGTTTCGTTTTACCGTGGCACGGTTTCGAATGTGTTTAGGAGCACTGGAGCTGCAGCTATCTTAGTCTTGTATGATGAGGTCAAGAAATTTATGAATTGGGGAGGATTGTGA 975 0.4585 MSGEDEEKKLKLKRNSSRLSNFQRDLMAGALMGGAIHTLVAPIERAKLLLQTQESNLAIVASGRRKFKGMFDCIIRTVKEEGVVSLWRGNGSSVLRYYPSVALNFSLKCFFFQQDLYRSILRGGNSDADNFFSGASANFVAGSAAGCTSLILVYPLDIAHTRLAADIGRTEVRQFRGIYHFLATIFQKDGVRGIYRGLPASLHGMVVHRGLYFGGFDTIKEKLSEESKPELVLWKRWMVAQAVTTSAGLISYPLDTVRRRMMMQSGMEHPVYTSTLDCWRKIYRTEGLVSFYRGTVSNVFRSTGAAAILVLYDEVKKFMNWGGL 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03773 324 SUPERFAMILY Mitochondrial carrier 20 314 IPR023395 -
Vifa2g03773 324 Gene3D Mitochondrial carrier domain 18 319 IPR023395 -
Vifa2g03773 324 ProSiteProfiles Solute carrier (Solcar) repeat profile. 235 318 IPR018108 -
Vifa2g03773 324 FunFam probable ADP,ATP carrier protein At5g56450 24 321 - -
Vifa2g03773 324 PRINTS Mitochondrial carrier protein signature 38 52 IPR002067 GO:0055085
Vifa2g03773 324 PRINTS Mitochondrial carrier protein signature 195 213 IPR002067 GO:0055085
Vifa2g03773 324 PRINTS Mitochondrial carrier protein signature 89 109 IPR002067 GO:0055085
Vifa2g03773 324 PRINTS Mitochondrial carrier protein signature 240 262 IPR002067 GO:0055085
Vifa2g03773 324 PRINTS Mitochondrial carrier protein signature 148 166 IPR002067 GO:0055085
Vifa2g03773 324 PRINTS Mitochondrial carrier protein signature 25 38 IPR002067 GO:0055085
Vifa2g03773 324 ProSiteProfiles Solute carrier (Solcar) repeat profile. 20 114 IPR018108 -
Vifa2g03773 324 ProSiteProfiles Solute carrier (Solcar) repeat profile. 133 222 IPR018108 -
Vifa2g03773 324 PRINTS Adenine nucleotide translocator signature 100 112 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vifa2g03773 324 PRINTS Adenine nucleotide translocator signature 22 34 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vifa2g03773 324 PRINTS Adenine nucleotide translocator signature 236 252 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vifa2g03773 324 PRINTS Adenine nucleotide translocator signature 125 138 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vifa2g03773 324 PRINTS Adenine nucleotide translocator signature 67 88 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vifa2g03773 324 Pfam Mitochondrial carrier protein 233 320 IPR018108 -
Vifa2g03773 324 Pfam Mitochondrial carrier protein 21 107 IPR018108 -
Vifa2g03773 324 Pfam Mitochondrial carrier protein 136 225 IPR018108 -
Vifa2g03773 324 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 19 321 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03773 Vifa-Chr2 1105628795 1105633964 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03773 22 321 Antiporters AT5G17400 36.688 1.48e-61 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03773 K05863 - gmx:100797251 525.783