Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03764 ATGTTTTTTTTCGAGGATCTCTGGCAAGTACTTCTCCAGTACCTCATCGAAAAAACTCGATTCTTCTTCTCCGAAAAGGAATCTTTATCAATGACGAACTCAACATGCGGAGGAGCGGAGTCCGACCTATGCCGAGACGAATCCGCGGCGTTCATTCTCAAATTCATAGCCATGGCGTCAATTCTCTTAGCAGGTATGGCAGGAATAGCTATTCCTCTCATCGGTAAACACCGACGCTTTCTCAAAACCGACGGCAACCTCTTCGTCGCTGCCAAGGCTTTTGCTGCTGGCGTGATTCTCGCCACCGGTTTCGTCCATATGCTATCCGATGCAACAAAAGCGCTTAACAGTCCTTGCTTACCGGAGTTTCCGTGGTCGAAGTTTCCGTTCACGGGTTTCTTTGCTATGATGGCGGCGCTGTTTACGCTTTTGCTTGATTTTGTTGGTACTCAGTATTATGAAAGCAAGCAAGGGGTGAACCGGACGGTGGAGGAGCAAGCGAGGGTGGGGACGTTGGAGGAAGGGATTGCTGGGAAAGTGTTTGGAGAAGAAGAGAGTGGTGGAATGCATATAGTTGGAATGCATGCACATGCGGCGCATCATAGACATAACCATGCTCATGGTAATGAGGCATGTGATGGCCATGGCATCGTGAAGGAAGAACATGGCCATGCTCACGCTCACGCACTACTCACTGATGATGAAGAAACTGACGTACGACACGTCGTCGTTTCGCAGGTGTTGGAGCTTGGGATAGTATCACATTCAGTGATAATTGGGTTGTCTCTGGGAGTTTCACAAAGTCCTTGTGCTATAAGGCCTCTAATTGCAGCGTTATCTTTCCATCAGTTTTTTGAAGGGTTTGCACTTGGAGGGTGCATATCCCAAGCTCAATTCAAGACCTCATCAGCAACAATAATGGCTTGTTTTTTTGCACTGACTACACCTATTGGTGTTGGCATTGGGACGGGTATTGCTTCGGTTTATAACCCTTACAGTCCTGGTGCACTCATTGCTGAAGGTATATTGGACTCATTGTCAGCAGGGATTTTAGTTTATATGGCTTTAGTAGACTTGATAGCAGCTGATTTTCTTAGTAAAAGAATGAGTTGTAACTTTAGGTTGCAGTTAGTGTCTTATTGTATGCTTTTCCTTGGAGCTGGGTTAATGTCTTCACTTGCAATATGGGCATGA 1194 0.4623 MFFFEDLWQVLLQYLIEKTRFFFSEKESLSMTNSTCGGAESDLCRDESAAFILKFIAMASILLAGMAGIAIPLIGKHRRFLKTDGNLFVAAKAFAAGVILATGFVHMLSDATKALNSPCLPEFPWSKFPFTGFFAMMAALFTLLLDFVGTQYYESKQGVNRTVEEQARVGTLEEGIAGKVFGEEESGGMHIVGMHAHAAHHRHNHAHGNEACDGHGIVKEEHGHAHAHALLTDDEETDVRHVVVSQVLELGIVSHSVIIGLSLGVSQSPCAIRPLIAALSFHQFFEGFALGGCISQAQFKTSSATIMACFFALTTPIGVGIGTGIASVYNPYSPGALIAEGILDSLSAGILVYMALVDLIAADFLSKRMSCNFRLQLVSYCMLFLGAGLMSSLAIWA 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03764 397 PANTHER ZINC/IRON TRANSPORTER 52 390 - -
Vifa2g03764 397 NCBIfam ZIP zinc/iron transport family 38 397 IPR004698 GO:0005385|GO:0016020|GO:0071577
Vifa2g03764 397 Pfam ZIP Zinc transporter 51 394 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03764 Vifa-Chr2 1103778885 1103780638 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03764 30 397 Inorganic Solute Cotransporters AT1G10970 72.340 1.36e-180 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03764 K14709 - gmx:100812212 601.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g04727 3 1360398962 1360400147 Vifa2g03764 2 1103778885 1103780638 PCT