Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03755 ATGGAGAGAGATATACTACCTTGGTTGCAACCTCCAACCGAAGAAGAGCAACACACAACTGGCGGTAACAACAACAATGGCGATGATTTCAGAAAGATGGATAAAGCTTCAATACTTGGAGATGCTATTGATTACTTGAATGAGTTACAACAAAAAGTTGATGATCTTCAAAGTGAGTTAGAGTCAATTTCTCTTGGATCATCACTGGCACCCACCACTTCAACCCTTCATGTACAAGTGAATGGAGAATTATGCCATAGCAATGTGCCAAGCGCTAGAAACCAATCAATAAAGGTTGAGGCATGGGAAATGGAAGAGGGAACTGTCAACATCCATATGGTTTGTGCCTACAAACCAGGTGTTTTGCTTTCAGTTATGAAGGCATTTGAAATCCTTGGATTAGACATTCACCAAGCTAACATAAATTGTTTCAATGGTTTTACTATAGATGTATACAAAGCTGAGCAATGCAGACAAGGTCAGAAAGTGAACACTCAACTAATTAAAGAAGTGTTGGTGAATGCAGTGGATTACCATATGGCATGA 546 0.3938 MERDILPWLQPPTEEEQHTTGGNNNNGDDFRKMDKASILGDAIDYLNELQQKVDDLQSELESISLGSSLAPTTSTLHVQVNGELCHSNVPSARNQSIKVEAWEMEEGTVNIHMVCAYKPGVLLSVMKAFEILGLDIHQANINCFNGFTIDVYKAEQCRQGQKVNTQLIKEVLVNAVDYHMA 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03755 181 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 32 170 - -
Vifa2g03755 181 MobiDBLite consensus disorder prediction 13 27 - -
Vifa2g03755 181 MobiDBLite consensus disorder prediction 1 31 - -
Vifa2g03755 181 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 31 67 IPR036638 GO:0046983
Vifa2g03755 181 Gene3D - 3 64 IPR036638 GO:0046983
Vifa2g03755 181 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 49 IPR011598 GO:0046983
Vifa2g03755 181 Coils Coil 39 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03755 Vifa-Chr2 1101069857 1101077229 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03755 32 155 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 52.632 4.10e-41 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03755 - - psat:127084450 228.409