Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03742 ATGAAAAAAGCACTTCTTAAGGAACCCAGAAGTCTTGCCTCTGTTATGCGCCTTCAGTTTCATGATTGTTTTGTTAATGGGTGTGATGCTTCTATGTTGCTTGATGATACACCAACAATGCTTGGAGAGAAATTGGCCCTTTCAAATATAAATTCTCTAAGATCATTTGAGGTCGTTGATAAGGTTAAAGAGGCTCTTGAGAAGGCTTGTCCTGGAGTTGTTTCTTGTGCTGATATCATAATCATGGCTTCTAGAGATGCTGTAGCATTCACAGGAGGACCTGATTGGGAAGTGAAGTTAGGAAGATTGGACAGTTTAATAGCAAGTCAAGAAGACTCAAACAAATCATCCAAGTCCAGAAAACCTGTAACCCACCTCGCCATCACTGTTCAAATCCAACACCCTGTTCAACAGGAAATCATCACAGTTCCTCTTCCTCTTACGCCAACCTCATCTCTCTCATCTCATCGCTAA 474 0.4135 MKKALLKEPRSLASVMRLQFHDCFVNGCDASMLLDDTPTMLGEKLALSNINSLRSFEVVDKVKEALEKACPGVVSCADIIIMASRDAVAFTGGPDWEVKLGRLDSLIASQEDSNKSSKSRKPVTHLAITVQIQHPVQQEIITVPLPLTPTSSLSSHR 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03742 157 PRINTS Haem peroxidase superfamily signature 74 91 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g03742 157 PRINTS Haem peroxidase superfamily signature 12 26 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g03742 157 PRINTS Haem peroxidase superfamily signature 92 104 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g03742 157 PANTHER PEROXIDASE 72-RELATED 1 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g03742 157 Gene3D - 1 136 - -
Vifa2g03742 157 ProSiteProfiles Plant heme peroxidase family profile. 1 157 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g03742 157 PRINTS Plant peroxidase signature 73 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g03742 157 PRINTS Plant peroxidase signature 54 67 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g03742 157 PRINTS Plant peroxidase signature 14 34 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g03742 157 PRINTS Plant peroxidase signature 92 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g03742 157 SUPERFAMILY Heme-dependent peroxidases 2 114 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vifa2g03742 157 Pfam Peroxidase 2 127 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03742 Vifa-Chr2 1095963559 1095964032 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03742 1 114 Peroxidase AT2G22420 82.456 2.33e-66 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03742 K00430 - fve:101299243 206.453