Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03723 ATGTCATTCCAAAGCGAAGCACCGGTTCAGTTACCATGCACTCCGGTTCTCGAAACCATGCTTTCAGAAAGTGAAATACAATACCTCATTTCCCTCATTAACCAACCAGAATATCCAACCAGTCCTAGATCAGGTTCACAGGGTTCAAACCGGACGGTTTACTCGTCAGAAGAAAGAAAGTTGAGGCGCATGAAGTCGAACCGGGAATCAGCTCAACGGTCCCGTTCCAGAAAGAAGAAGCATTTAGAGAATATGACGAACCGGTTGAACCGGTTGAAAATTCAAAACCTAGAACTAAAAAACCAACTATCATTCACCATGCATAAATATCTTCTACTTTCCCTAGAGAATGAACAGTTAATATCAGAATCCATTGCTCTTTTAGCAACACTTTCAGATTTATGTGCCATTTTAAGCAACACTTATAAGCCACAATGA 438 0.4087 MSFQSEAPVQLPCTPVLETMLSESEIQYLISLINQPEYPTSPRSGSQGSNRTVYSSEERKLRRMKSNRESAQRSRSRKKKHLENMTNRLNRLKIQNLELKNQLSFTMHKYLLLSLENEQLISESIALLATLSDLCAILSNTYKPQ 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03723 145 Gene3D - 57 110 - -
Vifa2g03723 145 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 57 104 IPR004827 GO:0003700|GO:0006355
Vifa2g03723 145 CDD bZIP_plant_GBF1 60 110 IPR045314 GO:0003700|GO:0006355
Vifa2g03723 145 MobiDBLite consensus disorder prediction 55 71 - -
Vifa2g03723 145 Coils Coil 54 102 - -
Vifa2g03723 145 FunFam BZIP transcription factor 57 108 - -
Vifa2g03723 145 SUPERFAMILY Leucine zipper domain 59 111 IPR046347 GO:0003700|GO:0006355
Vifa2g03723 145 SMART brlzneu 55 119 IPR004827 GO:0003700|GO:0006355
Vifa2g03723 145 PANTHER BZIP TRANSCRIPTION FACTOR 44 41 139 - -
Vifa2g03723 145 MobiDBLite consensus disorder prediction 37 87 - -
Vifa2g03723 145 MobiDBLite consensus disorder prediction 37 54 - -
Vifa2g03723 145 Pfam Basic region leucine zipper 56 103 IPR004827 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03723 3 138 bZIP Transcription Factor Family AT3G49760 35.664 1.42e-19 78.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vifa2g03723 bZIP_2 3.7e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03723 - - cam:101509317 207.608