Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa2g03681 | ATGATGGAGCATAAAAGGAGCATTTGCTCTGTTGATCAAAGCAATTATAATTCCATTGCATCTAAAAAGCAAAAGCCTGATTTATCGATCACCACTAAGGATAGGAAGGAAAAGATTGGCGAACGAATTGTTGCTCTTCAACAGCTTGTTTCACCATATGGAAAGACAGATACATCTTCTGTTCTAAAGGAGGCGATGGAATACATAGGGTTCCTTCATAAACAAGTTAAGCTGCTTAGTGCTCCTTACCTTGAAACTACACCAGCAATCCAGATGCAGGATACAGAGTCATGCAGCCTTAGGAGTAGAGGGTTATGTCTTTTTCCTGTCTCATTTACTATTGGAGTTGCTGAGGGCAATGGTGCAGACATTTGGGCTCCGATCAAGACCACTTCGCCTGATTCTGAGAAAGATGTTTCTCAAATTCAGTGA | 432 | 0.412 | MMEHKRSICSVDQSNYNSIASKKQKPDLSITTKDRKEKIGERIVALQQLVSPYGKTDTSSVLKEAMEYIGFLHKQVKLLSAPYLETTPAIQMQDTESCSLRSRGLCLFPVSFTIGVAEGNGADIWAPIKTTSPDSEKDVSQIQ | 143 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa2g03681 | 143 | Gene3D | - | 20 | 94 | IPR036638 | GO:0046983 | |
Vifa2g03681 | 143 | PANTHER | TRANSCRIPTION FACTOR BHLH83-RELATED | 22 | 113 | - | - | |
Vifa2g03681 | 143 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 31 | 90 | IPR036638 | GO:0046983 | |
Vifa2g03681 | 143 | FunFam | Transcription factor bHLH113 family | 22 | 98 | - | - | |
Vifa2g03681 | 143 | CDD | bHLH_AtbHLH_like | 29 | 80 | IPR045239 | - | |
Vifa2g03681 | 143 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 23 | 72 | IPR011598 | GO:0046983 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa2g03681 | Vifa-Chr2 | 1077326466 | 1077327577 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa2g03681 | 1 | 130 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT1G05710 | 51.974 | 1.58e-50 | 157 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa2g03681 | - | - | gmx:100809747 | 236.498 |