Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03680 ATGGATCAAGTGAAAGATGAAGAGTCACAGTATCAATTTGGTGGTGTATCAGAAGATGAGCATGTGGGGTTATTGATTCAGAAAGAGATTTCATTTGGGTTCAAAAAAGATGGAATTTTGATGTTTGATGAATCCTTGAAAAGTGCTCGTTTGAATGCTATCAATTGGATTTTCAAAATAACAGAAGCATTGGATTTTCACTTTCAAACAGCTTATTTGTCAGTGACTTACTTGGATCAGTTCCTTACCAAACGCTACATTGATGCGGAGAAGAATTGGGCGATAAGGTTGCTATCGATTGCATGTCTTTCTTTGGCTGCAAAGATGGAAGAATGCAATGTGCCTGAACTATCAAAGTTTCAATTGGAAGATTGTTATTTCTTTCAGGGAAAAGTGGTTCAAAAAATGGAACTTTTGGTTCTTACCACATTGGATTGGAACATGAGTATCATTACTCCCTTTTCATTCCTTTCTTACTTTGTCAAAAAGTTCAGCAATGATTCTGTGTCGAATCTTATTGTTTCTAACACAATGCAACCTATCTTCACTGTAATTATGGAAGGGTTCAATCTAATGGATCACAAGCCATCTGTTGTTGCAGCGGCTGCTACTTTGTTGGCATTGGATCAAACATTGACCATAGAAGATGTGAGGTTGAAAATGAATTCAATTTCGCAAATTGAACCGAATGATGTATTTGATTGCTACAATCTAATTCAGAGATTATATGAGGAGAAGATGAAAAGAGATGAGCATTTATATACACCGAATTCGTCGGTTATTCGATCCAGGACAATCGACTATGTTGTTTCTATGTCAAAGAGAAGAAGACTGTCATTCATTGATAATGAAAATGGTGGTGACAAGAAGGGGCCACATCAAGAAGATCCCAAAACTTGA 900 0.3656 MDQVKDEESQYQFGGVSEDEHVGLLIQKEISFGFKKDGILMFDESLKSARLNAINWIFKITEALDFHFQTAYLSVTYLDQFLTKRYIDAEKNWAIRLLSIACLSLAAKMEECNVPELSKFQLEDCYFFQGKVVQKMELLVLTTLDWNMSIITPFSFLSYFVKKFSNDSVSNLIVSNTMQPIFTVIMEGFNLMDHKPSVVAAAATLLALDQTLTIEDVRLKMNSISQIEPNDVFDCYNLIQRLYEEKMKRDEHLYTPNSSVIRSRTIDYVVSMSKRRRLSFIDNENGGDKKGPHQEDPKT 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03680 299 CDD CYCLIN_AtCycD-like_rpt1 49 146 - -
Vifa2g03680 299 PANTHER CYCLINS 50 246 IPR039361 -
Vifa2g03680 299 SUPERFAMILY Cyclin-like 17 148 IPR036915 -
Vifa2g03680 299 SMART cyclin_7 55 142 IPR013763 -
Vifa2g03680 299 SMART Cyclin_C_2 151 284 IPR004367 -
Vifa2g03680 299 Gene3D - 46 149 - -
Vifa2g03680 299 Gene3D - 150 237 - -
Vifa2g03680 299 Pfam Cyclin, N-terminal domain 26 149 IPR006671 -
Vifa2g03680 299 Pfam Cyclin, C-terminal domain 151 246 IPR004367 -
Vifa2g03680 299 FunFam Cyclin-D5-1 45 149 - -
Vifa2g03680 299 SUPERFAMILY Cyclin-like 133 249 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03680 Vifa-Chr2 1076935729 1076937092 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03680 48 231 Core Cell Cycle Gene Families AT4G37630 40.933 9.57e-38 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03680 K18811 - gmx:100780266 310.457