Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vifa2g03679 | ATGGAGAGTTACCTGAATCAGAATTTCGGAGATGTGAAACCGAAAAACTCATCGGAAGAAGCGCTTCAGAGATGGAGGAAGCTTTGTTGGGTTGTTAAGAATCGAAAAAGAAGGTTTCGTTTTACTGCTAATCTTTCTAAGCGATTTGAAGCTGAAGCTATAAGACGCTCAAATCAGGAGAAATTCAGAGTTGCAGTGTTGGTTTCACAAGCTGCGCTTCAGTTTATCCATGGCTTAAGTTTGTCAAGTGAGTACAAAGTACCGGAGGACGTTAAAGCTGCAGGTTTTGAAATATGTGCTGATGAGGTGGGATCAATTGTTGATGGACGTGATGTGAAGAAGTTGAAAATTCATGGTGGGGTTGAGGGTATCACGGGTAAACTCAACTCGTCTGTCAATGATGGGGTATCAACATCTGAGCCGCTCCTGAATCGGAGAAAAGAAATATATGGAATTAATAAATTCACTGAAAGTCCAGCCCGGGGATTTTGGGTTTTTGTATGGGAAGCACTTCAAGATACAACCCTTATGATACTTGCGGTCTGTGCTTTTGTCTCTTTAGTGGTTGGCATAATAATGGAAGGGTGGCCTAAGGGTGCACAAGATGGGATTGGTATTGTTGCTAGCATATTGCTTGTAGTGTTTGTCACTGCAACTAGTGATTATAGACAATCGTTGCAGTTTAAGGATCTAGACAAAGAGAAGAAAAAAATTACTGTGCAAGTCACGCGAAATGGATATAGGCAGAAAATTTCAATATATGATCTACTTCCTGGTGATATTGTCCATCTGAATATCGGAGATCAAGTCCCTGCTGATGGGCTTTTTGTGTCCGGTTTCTCTGTGTTGATAAATGAATCAAGTTTGACGGGAGAAAGTGAACCAGTGAATGTTAGTGACCTTAATCCCTTTCTTCTATCTGGAACCAAAGTTCAGGATGGATCATGCAAGATGCTTGTGACTACTGTTGGAATGAGAACTCAGTGGGGTAAACTAATGGCTACTTTAAGTGAAGGGGGAGATGATGAAACTCCCTTGCAGGTAAAACTCAATGGTGTGGCTACCATTATCGGGAAAATAGGCCTGTTTTTTGCTGTAGTGACTTTCTCTGTGTTGGTCCAAGGGCTATTTAGCCGCAAGCTGCAAGAAGGTTCCCAATGGATATGGTCTGGTGATGATGCTATGGAAATCGTGGAATTCTTCGCTATTGCAGTTACAATCGTTGTTGTTGCTGTTCCTGAAGGTTTACCTTTAGCTGTTACATTGAGCCTTGCTTTCGCCATGAAAAAGATGATGAACGATAAGGCACTTGTCCGTCATTTGGCTGCTTGTGAGACGATGGGATCTGCCACTACTATCTGTAGTGACAAGACTGGTACATTAACCACTAATCATATGACTGTTGTAAAAGCTTGCGTATGTGGGAAGATCAAAGAGGTAAAGAGCTCTATTGACTCTTCTGATTTCTCACTTGATCTTCCTGATTCTGCTATGGCAATTCTACTTGAATCGATATTCAATAACACTGGAGGAGAAGTTGTCAAAAATGAAAATGGGAAGATTGAGATTCTGGGATCACCAACTGAGACTGCCATTTTGGAATTTGGGCTGTCACTTGGTGGTGATTTCCATAAAGAACGACAAATTTCAAAACTTGTGAAAGTTGAACCATTTAATTCTATAAAAAAGCGCATGGGGGTAGTTCTTCAGCTTTCTGATGGTGGTTACAGAGCACACTGCAAGGGTGCATCTGAAATAATTCTTGCTGCCTGTGACAAATATGTAGACTCGAATGGCGAGGTTGTTCCACTTGATGAAGACTCGACCAGACACTTGAATGATACAATTGAAAAATTTGCCAATGAAGCTCTCCGGACCCTTTGCCTTGCTTACATAGATATTCATGACGAATTTTTAGTTGGAAGTTCTATTCCTATAAATGGTTACACTTGCATAGGAATAGTGGGTATTAAAGATCCAGTTCGTCCTGGTGTTCGAGAGTCTGTAGCCATCTGTAAGGCCGCCGGTATTACTGTTAGGATGGTTACCGGAGATAACATAAATACTGCAAAGGCAATTGCTAGAGAATGTGGAATTTTAACAGACGGTATAGCAATTGAAGGCCCAGAATTCCGTGAGATGAGTGAGGAAGAATTACTTGATATAATTCCAAAAATTCAGGTAATGGCTCGATCTTCACCCATGGACAAGCATACCCTAGTGAAATACTTGAGGACAACATTTGAAGAGGTTGTTTCAGTTACCGGTGATGGTACAAATGATGCGCCAGCACTTCATGAAGCAGATATTGGACTTGCAATGGGCATTGCTGGAACTGAGGTAGCAAAAGAAAGCGCCGATGTAATAATTTTAGACGATAATTTTTCAACTATTGTGACTGTGGCCAAATGGGGCCGTTCAGTCTACATAAACATACAGAAATTTGTGCAGTTCCAGCTAACTGTAAATGTTGTTGCTTTGATAGTCAACTTCACTTCTGCTTGTTTGACCGGGAATGCTCCCCTTACTGCGGTTCAACTTCTATGGGTCAATATGATTATGGACACTCTTGGAGCACTTGCACTTGCCACTGAACCTCCTACTGATGAGTTGATGAAAAGACCACCAGTTGGTAGAAAAGGAAACTTTATCAGTAATGTGATGTGGAGGAATATCGCGGGGCAGTCCATATATCAATTTGTCATAATCTGGTTACTCCAAACAAGAGGAAAAACAACTTTTCATCTTGATGGCCCAGATGGTGATCTGATTTTGAATACACTCATTTTCAATTCATTTGTATTCTGTCAGGTTTTCAATGAGATCAGTTCTAGAGATATGGAAAGGATAAATGTTTTTGAAGGTATACTGAAGAATTACGTGTTCACAGCAGTTCTCACCTGCACAACCATCTTCCAAATCGTAATAGTTGAATTCTTGGGCACCTATGCCAACACATCTCCACTTAGTTTGAAACTGTGGTTCGTTAGCGTTTTCCTCGGAGTCCTTGGCATGCCAATTGGAGCAGCTATAAAGATGATACCTGTTGGAGCTGTCTAA | 3060 | 0.4111 | MESYLNQNFGDVKPKNSSEEALQRWRKLCWVVKNRKRRFRFTANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLSLSSEYKVPEDVKAAGFEICADEVGSIVDGRDVKKLKIHGGVEGITGKLNSSVNDGVSTSEPLLNRRKEIYGINKFTESPARGFWVFVWEALQDTTLMILAVCAFVSLVVGIIMEGWPKGAQDGIGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKITVQVTRNGYRQKISIYDLLPGDIVHLNIGDQVPADGLFVSGFSVLINESSLTGESEPVNVSDLNPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFSVLVQGLFSRKLQEGSQWIWSGDDAMEIVEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKACVCGKIKEVKSSIDSSDFSLDLPDSAMAILLESIFNNTGGEVVKNENGKIEILGSPTETAILEFGLSLGGDFHKERQISKLVKVEPFNSIKKRMGVVLQLSDGGYRAHCKGASEIILAACDKYVDSNGEVVPLDEDSTRHLNDTIEKFANEALRTLCLAYIDIHDEFLVGSSIPINGYTCIGIVGIKDPVRPGVRESVAICKAAGITVRMVTGDNINTAKAIARECGILTDGIAIEGPEFREMSEEELLDIIPKIQVMARSSPMDKHTLVKYLRTTFEEVVSVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFTSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPTDELMKRPPVGRKGNFISNVMWRNIAGQSIYQFVIIWLLQTRGKTTFHLDGPDGDLILNTLIFNSFVFCQVFNEISSRDMERINVFEGILKNYVFTAVLTCTTIFQIVIVEFLGTYANTSPLSLKLWFVSVFLGVLGMPIGAAIKMIPVGAV | 1019 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vifa2g03679 | 1019 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 456 | 462 | IPR018303 | - | |
| Vifa2g03679 | 1019 | FunFam | Calcium-transporting ATPase | 464 | 660 | - | - | |
| Vifa2g03679 | 1019 | Pfam | E1-E2 ATPase | 237 | 432 | - | - | |
| Vifa2g03679 | 1019 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 119 | 1015 | IPR023298 | - | |
| Vifa2g03679 | 1019 | PRINTS | H+-transporting ATPase (proton pump) signature | 787 | 812 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Vifa2g03679 | 1019 | PRINTS | H+-transporting ATPase (proton pump) signature | 612 | 630 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Vifa2g03679 | 1019 | PRINTS | H+-transporting ATPase (proton pump) signature | 755 | 771 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Vifa2g03679 | 1019 | Gene3D | - | 464 | 660 | IPR023299 | GO:0000166 | |
| Vifa2g03679 | 1019 | Pfam | Cation transporter/ATPase, N-terminus | 119 | 186 | IPR004014 | - | |
| Vifa2g03679 | 1019 | Pfam | Ca2+-ATPase N terminal autoinhibitory domain | 5 | 49 | IPR024750 | GO:0005516 |
Showing 1 to 10 of 38 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vifa2g03679 | K01537 | - | gmx:547998 | 1806.19 |
Showing 1 to 1 of 1 entries
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Vifa2g03679 | 2 | 1076856936 | 1076861373 | Vifa2g03679 | 2 | 1076856936 | 1076861373 | ECH |
Showing 1 to 1 of 1 entries