Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03666 ATGTCGCGACCTTCTATAATATGTTCTAATGATTTGAGAAATGCTGTGGAAGAAATTAAGGAATTAGGGTTTGACCCTTCCAAAGTCAGTTTCGGTGTAGCATTATTGGCTAAAAGGGCTATCACTAAATCCCAATGGGATGCCAAATTTGATGTCTTGAAGAAGTGGGGTTGCTCTGAAGATGCAATTTCTAATGCATTTAAGAGGCAACCTAACTTCATGCTTAGGTCGCCGGAGAAACTCAATGCGGTGATGAGTTTTTGGGTCGAGGAGCTCGGTTGGGATCCTTCTGTGCTCTTGGCTGCACCGACGCTTTTTGGGCATAGTATAGAGAAAAGGCTTACTCCAAGGGCTTTGATTGTCAAGTATCTTCTGTCCAAAGGTTTGATAAAGGAGGGTGCTTGTTTAGCTACACCGTTTAATGTGACTGATGAGCATTTCCAGCGAAGGTATGTGAAACGTTTTAAGGAAACATCTGAGCTGTTAAAGCTAAATCAGGGAGAATGTTAG 510 0.4235 MSRPSIICSNDLRNAVEEIKELGFDPSKVSFGVALLAKRAITKSQWDAKFDVLKKWGCSEDAISNAFKRQPNFMLRSPEKLNAVMSFWVEELGWDPSVLLAAPTLFGHSIEKRLTPRALIVKYLLSKGLIKEGACLATPFNVTDEHFQRRYVKRFKETSELLKLNQGEC 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03666 169 Pfam mTERF 44 148 IPR003690 GO:0003690|GO:0006355
Vifa2g03666 169 PANTHER CGI-12 PROTEIN-RELATED 2 154 IPR003690 GO:0003690|GO:0006355
Vifa2g03666 169 SMART mt_12 64 95 IPR003690 GO:0003690|GO:0006355
Vifa2g03666 169 SMART mt_12 96 130 IPR003690 GO:0003690|GO:0006355
Vifa2g03666 169 Gene3D Transcription termination factor 3, mitochondrial 1 160 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03666 Vifa-Chr2 1073609033 1073611419 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vifa2g03666 mTERF 6.9e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03666 K15032 - gmx:102666739 179.489