Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03656 ATGATCGAAACACGCTCTTCAAAGAGAAAATCCAACCACCAGAATCAACCCATCAAGAAGAAACGTGTCGTGTTAGGACAACTTCCCAATTCAACCAATCTCATTCTTCCTCAAAAAAACCTTAACCCAAGAAAACCAACCCCGGGGAAGAAGAACAAGAACCCTAGTGAAGATCTCGATGGCCCATTTGTTTCATCGGTCTACATGCATCTTCGCTCAATGGAGATGGAGAAAAAGAGAAGACCCATGATGGATTACATGGTTATTGTTCAGAGAGATATTACTCCACATATGAGAGGGATTTTGATTGATTGGTTAGTTGAGGTTGCGGAAGAGTACAAGCTTGTTCCTGATACACTTCATCTTGCTGTTTCCTACATAGATAGGTTTCTGTCTTTTAATAATATCAATAGGACCAAGCTTCAGTTGTTGGGTGTTTCGTCCATGCTCATTGCGTCGAAACATGAAGAAATAAGCCCGCCTTATGTGGAAGAGTTCTGTTTTATAACTGACAATTCTTATAACAAAGATGAGGTTTTAGAGATGGAGACTGACATACTCAAAACCTTAGAGTTTGATACAGCCAATCCCACTGTTAAGACTTTTCTAAGGAGGTTTAATGAAATTGCATGTGAGAAAATAAATGCTTCAAGTTTGCAGTTTGAGTTCTTAAGTAACTATCTTGCTGAGCTAAGTTTATTGGATTGTGTTTGTTTGAGGTTCTTACCTTCTTTGGTGGCTGCGTCTGCCACACTGCTTGCTCGATTCATTGTTTGGCCTAAAGCTTCTCCTTGGGAAAACATTAGCCCTGCAAGAATATTCGAGATATAA 831 0.3959 MIETRSSKRKSNHQNQPIKKKRVVLGQLPNSTNLILPQKNLNPRKPTPGKKNKNPSEDLDGPFVSSVYMHLRSMEMEKKRRPMMDYMVIVQRDITPHMRGILIDWLVEVAEEYKLVPDTLHLAVSYIDRFLSFNNINRTKLQLLGVSSMLIASKHEEISPPYVEEFCFITDNSYNKDEVLEMETDILKTLEFDTANPTVKTFLRRFNEIACEKINASSLQFEFLSNYLAELSLLDCVCLRFLPSLVAASATLLARFIVWPKASPWENISPARIFEI 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03656 276 MobiDBLite consensus disorder prediction 26 49 - -
Vifa2g03656 276 Pfam Cyclin, C-terminal domain 197 266 IPR004367 -
Vifa2g03656 276 FunFam G2/mitotic-specific cyclin 82 195 - -
Vifa2g03656 276 Pfam Cyclin, N-terminal domain 70 194 IPR006671 -
Vifa2g03656 276 PANTHER CYCLINS 47 255 IPR039361 -
Vifa2g03656 276 MobiDBLite consensus disorder prediction 1 61 - -
Vifa2g03656 276 SUPERFAMILY Cyclin-like 197 267 IPR036915 -
Vifa2g03656 276 ProSitePatterns Cyclins signature. 99 130 IPR006671 -
Vifa2g03656 276 Gene3D - 67 266 - -
Vifa2g03656 276 Gene3D - 80 195 - -
Vifa2g03656 276 SMART cyclin_7 201 275 IPR013763 -
Vifa2g03656 276 SMART cyclin_7 104 188 IPR013763 -
Vifa2g03656 276 SUPERFAMILY Cyclin-like 72 193 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03656 Vifa-Chr2 1069073439 1069075014 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03656 6 268 Core Cell Cycle Gene Families AT1G47230 49.828 2.89e-94 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03656 K06627 - gmx:100776007 318.931