Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03623 ATGAATCACTGTATCGGCGATGGAACTTCTTTTTGGAAGTTCTTTAATACATGGTCCGAAATATTTCAAGCTCAAGGCCATGGCTATGATCATGATGTCCCCATTTCACGCCAACCCTTTCACAATCGTTGGTTTCCAGAAGGTTATGGTCCGCTAATCAATCTTCCATTCAAACATCAGGACGAGTTTGTAAGCAGATTTAAAGCACCTGAGCTGAGAGAGAGAATCTTCCACTTTACGGCAGAGTCTATTGCAAAACTGAAAGCAAAGGCTAATAGGGAATATAATACAAACAAAATCTCTTCGTTCCAATCCCTATCAGCACATGTTTGGAGAAGTATAACCCGTGCACGCCGCCTAACAAATGATCGAAAAACAAGTTGTATGGTGGCTGTAAACAACCGACCGAGAATGAAACCGCCTCTTCCTGAAGAATACTTTGGGACCTCAGTTGATACAGTGAGTGCAGAAGCGACGGTAGGAGAATTACTTGAGAATGATTTGGGATGGGTAGCGTGGAAGGTTCATGTTGCTGTTACAAAGCATGACGAGTTAGAGATTCGAAAGAGTGTGGAAAAGTGGTTAGAGTATCCTGTTATACTCGACCTTGATCGCCACTATGATCCGTTAAGTGGTGTGGCAATGATAAGTTCGCCTAGGTTCAATATGTATGGGAATGAATTTGGGATGGGGAAAGCAGTGGCTGTTTTGTGTGGTTATGCAAACAAATGTGATGGGAATGTGACTGTATATGAGGGACATGAAGGAGGGGGGAGTATGGATTTGGAAATTTCTCTATCTTCAAATGTTATGATAGAGTTGGAATTGGATGACAACTTTATGAATGCAGTTTCTCTGACCAATATGTCAGGTACTTCTAGAGGACACTCTTAA 894 0.4195 MNHCIGDGTSFWKFFNTWSEIFQAQGHGYDHDVPISRQPFHNRWFPEGYGPLINLPFKHQDEFVSRFKAPELRERIFHFTAESIAKLKAKANREYNTNKISSFQSLSAHVWRSITRARRLTNDRKTSCMVAVNNRPRMKPPLPEEYFGTSVDTVSAEATVGELLENDLGWVAWKVHVAVTKHDELEIRKSVEKWLEYPVILDLDRHYDPLSGVAMISSPRFNMYGNEFGMGKAVAVLCGYANKCDGNVTVYEGHEGGGSMDLEISLSSNVMIELELDDNFMNAVSLTNMSGTSRGHS 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03623 297 Gene3D - 58 276 IPR023213 -
Vifa2g03623 297 Gene3D - 1 53 IPR023213 -
Vifa2g03623 297 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 282 - -
Vifa2g03623 297 Pfam Transferase family 1 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03623 Vifa-Chr2 1053733873 1053734766 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03623 1 275 Monolignol Biosynthesis Gene Families AT5G48930 28.522 5.01e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03623 - - vum:124831304 407.527