Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03603 ATGAACTCCTCCAAAAGTCTATTCACTTCAATTATTCTATTGCCTGCTGAACCTATAATACCATATTATCAAGTCTATAATGTTTGCATCGAACAACCACAAATGATAATAGCTGAAGGCATATGGGCTAGTCACACTTTTGTTCCTCCTAAATCTTCATTTACAATGCTTGAGATTCAAATTATTATCATATTTGTAATCACACAATTCTTTCATTTCTTTCTCAAGCGCTTAGGATTCTCTTGTTTCATTTCACAAGTCATGACTGGATTTCTTTTGGGGCCTTCTATTCCATTAGGACCACTATCTGAATACAAAAAGTTGTTGTTCCCATTTGGTGGTCCAGACATACTAAACACATTATCATCCTACGGTTATGCATTTTTCTTATTTGTAAACGCGGTTCAAATGGACTTCACATTGATAACAAAAACAGGCAAAAAATCTTGGGTCATTGCTCTTCTTTCCTATTTTTTGCCCATAATGGTTGGATTCCTCTTCATATTTATTACCCTTCCAATCTGGAAAGGTTTACTTGGCGATGATCAAGCTTTTAATTTACCCATTATCATTATATCTCATAGCGGTTGTTCTTTTGCCGTCATTGCTTCTTTGCTAAGAGACATTGGAATCCTCAACTCGGAATTGGGCCGCCTTGCATTGTCATCGGCTTTCTTAAACGATATCGCAGGAGGTATCTTTATGGGTGTGGGGACGGCCATAGGGAGTGGCATGGGGTTGGGAGTGTTTGTGGTTGTTAAAAACCTACTTTTATTCTTTGTTTATCTTATTGTGATTCCGTTAGTTGGGAGACCAATAATGATGTGGATTGTGAAAAATACACCAAAAGGAAAATCGATTAACAAGATATACATAAACGCAATAGTGGTAGCATTTTTCATGTTGGGTCTGTTAGCTGGAAAATTCAATCAACCATTCTATGCAGGAGTAATCATATTGGGTATTGCTGTTCCTGAAGGCCCGCCCTTAGGGTCAGAATTGGTTAACCAATTTGAATTATTCTCTACATGGATTCTCACTCCACTTTTTGTAACTTGTTGTGTCATGAAAGTAAATCTCACTCTTTGTGGCCCTCTTATTCTTATTATTGTTATCACCGGATTCATCCTATTGGTGCATACTATTAAGCTACTGCAGTGCATGATTGTCTGTAAATATTGTAATATGCCTACAACCGATGGTCTTTGCCTTGCCCTCATTTTGAGCTGCAAAGGTGTCGTTGATTGTTGCTCTTTTATTCTTATCTACGACGGAACCAGGAAAACTCCTGAAGCAATAGGTGTTATGGTTATATCAACCTTAGTGTTGGAAATAATCTCAAGAATAGGTGTAAAGGCATTATACGACCCATCAAGAAAATACGCGGGGTATCAAAAAAGAAACATAATGAACCTGAAACAAAACTCAGAGCTTCGTTTAGTAGCAGTTGTGCACAGAGCAAGTCACATGGTTCACATAAAGAATTTCCTGAACCTATGTTCTCCGGCACCAAACAACGCGCTAATAGCAGATGTGGTACATGTCATGGAATTAATTGGAAGAACAACACCCATTTTCATTGCACATCGTCTCCAACAAAAAATGGGGTCAACACATAACTACTCAGGAGAGTTAGTGGTAACATTCGACCTTTTCGAGCGTGACCACGCTGGTTCAGCAACAACTAACACATACACAGCAATATCTCCACAAACGTTTATGCAGGATGATGTTTGTTACCTTGCATTAGACAAAAATGCAGCTATTATAATTCTACCATTTCACATAAGATGGACGCAAGAAGGTTTAATTGAATCAGATGACAACATGGTAAGAATGTTGAATTCAAAGGTTTTGGAAAGAGCACCTTGTTCAATTGGGATTTTGGTTAATCGTGGCAACTCCACCACAATCAATAATAATAATAATTCAATTGGTTATAAAGTAGCCATGATTTTTCTTGGAGGGCCGGATGATAGAGAAGCTTTGTGTCTGGCTAAAAGGTTTTCCAAAAACTTAAATAACATATTGCATGTGTATCGGTTGCTAGCAAGCGACCAAGATGCAATGGGGTGGGAGAAAATGATTGATGATGAGGAGTTAAGGGAAGTTCGTGGAGCTTATGTTAAACTTGAAAATATAAAGTACGAAGAAAAAATAATAGAGGATGCATCTGAGACAACTACTTTCATTAGGGATATAGCAAATATATTTGATTTTATTATTGTTGGAAGACGTAATGGAGTTAAATCACATCAAACACTTGGTTTAGAAAATTGGACTGAATATACTGAATTGGGTGTTATTGGTGATTTGCTTGCTTCATCTGATATGAAAACTAAAGCTTCTTTTTTAGTTGTGCAACAACAACAAACTAATTCGATATCCTCCACTTAA 2397 0.3713 MNSSKSLFTSIILLPAEPIIPYYQVYNVCIEQPQMIIAEGIWASHTFVPPKSSFTMLEIQIIIIFVITQFFHFFLKRLGFSCFISQVMTGFLLGPSIPLGPLSEYKKLLFPFGGPDILNTLSSYGYAFFLFVNAVQMDFTLITKTGKKSWVIALLSYFLPIMVGFLFIFITLPIWKGLLGDDQAFNLPIIIISHSGCSFAVIASLLRDIGILNSELGRLALSSAFLNDIAGGIFMGVGTAIGSGMGLGVFVVVKNLLLFFVYLIVIPLVGRPIMMWIVKNTPKGKSINKIYINAIVVAFFMLGLLAGKFNQPFYAGVIILGIAVPEGPPLGSELVNQFELFSTWILTPLFVTCCVMKVNLTLCGPLILIIVITGFILLVHTIKLLQCMIVCKYCNMPTTDGLCLALILSCKGVVDCCSFILIYDGTRKTPEAIGVMVISTLVLEIISRIGVKALYDPSRKYAGYQKRNIMNLKQNSELRLVAVVHRASHMVHIKNFLNLCSPAPNNALIADVVHVMELIGRTTPIFIAHRLQQKMGSTHNYSGELVVTFDLFERDHAGSATTNTYTAISPQTFMQDDVCYLALDKNAAIIILPFHIRWTQEGLIESDDNMVRMLNSKVLERAPCSIGILVNRGNSTTINNNNNSIGYKVAMIFLGGPDDREALCLAKRFSKNLNNILHVYRLLASDQDAMGWEKMIDDEELREVRGAYVKLENIKYEEKIIEDASETTTFIRDIANIFDFIIVGRRNGVKSHQTLGLENWTEYTELGVIGDLLASSDMKTKASFLVVQQQQTNSISST 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03603 798 PANTHER CATION/H + ANTIPORTER 48 792 - -
Vifa2g03603 798 Gene3D - 55 462 IPR038770 -
Vifa2g03603 798 Pfam Sodium/hydrogen exchanger family 62 442 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03603 Vifa-Chr2 1046381613 1046384233 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03603 28 791 Antiporter Super Family AT5G22900 36.207 4.21e-150 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03603 K26731 - gmx:100797272 1025