Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03590 ATGTCTGGTCGGAATGAACGCCAACACCATCACCAACACCAACATCAACACCAACATCAACACCAACATCAACACCATACCGTTCCTCTTGCAGTGCTCTTGAAACGGGAATTGGCAAATGAGAAAGTCGAGAAATCAAATTTGGTTGTTGTGTATAGCCAAGCTAGCGAGAATAAGAAAGGAGAGGATTTCACGTTGATAAAGACCGAACGACAAAGAGTTGTTGCAGATGGGGTTTCTACCTATTCTGTTTTTGGGCTATTTGATGGACACAATGGATCTGCTGCTGCTGTTTATGCCAAGGAGAATCTTCTTAACAACGTTTTAAGTGCCATTCCCCCGGATCTCAACAGAGATGAGTGGGTAGCAGCATTGCCGAGGGCTTTGGTTGCTGGCTTTGTAAAAACTGATAAAGATTTTCAACAAAAAGCAAAAACATCAGGAACAACCGTAACCTTTGTGATTATAGAAGGATGGGTTATAACAGTTGCATCAGTTGGTGATTCCCGTTGCATACTTGAACCTTCTGAAGGTGGGATTCATTACTTGTCGGCAGATCATCGTCTAGACACCAATGAAGAGGAGAGGGCGCGTATCACTTCTAGTGGGGGTGAAGTTGGCCGGCTAAATACAGGTGGAGGTGCGGAGGTTGGCCCGTTGAGATGTTGGCCCGGTGGCCTGTGTCTTTCTCGATCCATTGGTGATATGGATGTTGGTGAATTTATTGTCCCTGTGCCATATGTGAAGCAAGTGAAGATTTCCACTTCTGGAGGAAGACTTATTATCTGCAGTGATGGAGTCTGGGATGCTCTATCTGCAGAAGCGGTCCTTGATTGTTGTCGTGGCATGTCAGCGGAGGCTGCGGCACCACATATTGTAAAGGAATCTTTGCAAGCAAAGGGACTTAGGGATGACACAACATGCATCGTGGTTGATATATTACCCCAGGAGAAGCCACCTACTTCTGCACCATCACAAAAGAGACCGGTAAAAGGAATGTTGAAGGCCATTTTTCGCAAAAAGTCCTCTGAGCCATCTTCATATATTGAAAAAGAATACGTTGAGCCAGATATGGTTCGGGAATTATACGAGGAAGGATCTGCCATGCTTTCAGAAAGGTTTGAAACAAAATATCCACTCTGCAACATGTTCAAGTTATTCATGTGTGCATTGCCAAGAGAAGAAAGAAGCCATGGAAGGGATACGAACATCAGACATATCAGTGGAAGTGACTAA 1236 0.4458 MSGRNERQHHHQHQHQHQHQHQHQHHTVPLAVLLKRELANEKVEKSNLVVVYSQASENKKGEDFTLIKTERQRVVADGVSTYSVFGLFDGHNGSAAAVYAKENLLNNVLSAIPPDLNRDEWVAALPRALVAGFVKTDKDFQQKAKTSGTTVTFVIIEGWVITVASVGDSRCILEPSEGGIHYLSADHRLDTNEEERARITSSGGEVGRLNTGGGAEVGPLRCWPGGLCLSRSIGDMDVGEFIVPVPYVKQVKISTSGGRLIICSDGVWDALSAEAVLDCCRGMSAEAAAPHIVKESLQAKGLRDDTTCIVVDILPQEKPPTSAPSQKRPVKGMLKAIFRKKSSEPSSYIEKEYVEPDMVRELYEEGSAMLSERFETKYPLCNMFKLFMCALPREERSHGRDTNIRHISGSD 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03590 411 CDD PP2Cc 51 313 IPR001932 -
Vifa2g03590 411 MobiDBLite consensus disorder prediction 1 27 - -
Vifa2g03590 411 ProSiteProfiles PPM-type phosphatase domain profile. 48 313 IPR001932 -
Vifa2g03590 411 SMART PP2C_SIG_2 59 313 IPR001932 -
Vifa2g03590 411 Gene3D - 39 320 IPR036457 -
Vifa2g03590 411 FunFam probable protein phosphatase 2C 12 52 319 - -
Vifa2g03590 411 SMART PP2C_4 43 311 IPR001932 -
Vifa2g03590 411 PANTHER PROTEIN PHOSPHATASE 31 312 IPR015655 GO:0004722|GO:0006470
Vifa2g03590 411 MobiDBLite consensus disorder prediction 8 24 - -
Vifa2g03590 411 Pfam Protein phosphatase 2C 77 300 IPR001932 -
Vifa2g03590 411 SUPERFAMILY PP2C-like 49 313 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03590 Vifa-Chr2 1041299688 1041303744 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03590 24 411 PP2C-type Phosphatase Gene Family AT1G47380 73.969 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03590 - - tpra:123914399 676.396