Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03529 ATGGGTATCACGGTTCCAGAAAACCTAACAACAAAACTGGGTGTCACGGTTCCAGAAAACCTAAACAGAGAACAGTACGTGTACCTCGCAAAGCTCGCAGAGCAAGCAGAGCGTTATGAAGAGATGGTATCCTTCATGCAGAAGCTAGTGCTAGTGTCCACACCATCCTCTGAGCTCAGCGTCGAAGAGAGGAACCTGATATCCGTCGCTTACAAGAACGTGATCGGGTCGCTACGTGCGGCGTGGAGGATTGTCTCGTCGATTGAGCAGAAGGAGGAAGGTAGAAAGAATGATGACCATGTTGTGCTTGTTAAGGATTATAGATCTAAGGTTGAAGCGGAGCTGTCGAATGTTTGTGCTAGTATTTTGGAGCTGTTGGACAAGAATTTGATTCCTTCGGGGTCTTCGAGTGAGAGTAAGGTTTTTTATTATAAGATGAAAGGGGATTATCATAGGTATTTGGCTGAGTTTAAGATTGGGGAGGAGAGGAAATCTGCTGCTGAGGATACTATGTTGTCGTACAAGGCTGCACAGGATATTGCTGCTGCTGATCTTCCATCTACTCATCCTATAAGATTGGGTTTGGCTCTCAATTTCTCTGTGTTCTATTATGAGATTCTTAACCAGTCTGACAAAGCTTGTGCCATGGCCAAACAGGCTTTTGAGGAAGCAATTGCTGAGCTGGACACGTTGGGAGAAGAATCTTACAAAGACAGCACGCTTATAATGCAACTTTTGAGAGACAACCTCACCCTTTGGACTTCTGATGTCCAGGATCAGCTAGATGAGCCCTGA 795 0.4541 MGITVPENLTTKLGVTVPENLNREQYVYLAKLAEQAERYEEMVSFMQKLVLVSTPSSELSVEERNLISVAYKNVIGSLRAAWRIVSSIEQKEEGRKNDDHVVLVKDYRSKVEAELSNVCASILELLDKNLIPSGSSSESKVFYYKMKGDYHRYLAEFKIGEERKSAAEDTMLSYKAAQDIAAADLPSTHPIRLGLALNFSVFYYEILNQSDKACAMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDVQDQLDEP 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03529 264 PIRSF 14-3-3 18 263 IPR000308 -
Vifa2g03529 264 SUPERFAMILY 14-3-3 protein 21 256 IPR036815 -
Vifa2g03529 264 PANTHER 14-3-3 PROTEIN 23 258 IPR000308 -
Vifa2g03529 264 SMART 1433_4 23 263 IPR023410 -
Vifa2g03529 264 PRINTS 14-3-3 protein zeta signature 58 87 IPR000308 -
Vifa2g03529 264 PRINTS 14-3-3 protein zeta signature 107 131 IPR000308 -
Vifa2g03529 264 PRINTS 14-3-3 protein zeta signature 138 160 IPR000308 -
Vifa2g03529 264 PRINTS 14-3-3 protein zeta signature 227 256 IPR000308 -
Vifa2g03529 264 PRINTS 14-3-3 protein zeta signature 173 199 IPR000308 -
Vifa2g03529 264 PRINTS 14-3-3 protein zeta signature 200 226 IPR000308 -
Vifa2g03529 264 FunFam 14-3-3 protein epsilon 20 264 - -
Vifa2g03529 264 ProSitePatterns 14-3-3 proteins signature 1. 64 74 IPR023409 -
Vifa2g03529 264 ProSitePatterns 14-3-3 proteins signature 2. 236 255 IPR023409 -
Vifa2g03529 264 Coils Coil 29 49 - -
Vifa2g03529 264 Pfam 14-3-3 protein 29 254 IPR023410 -
Vifa2g03529 264 Gene3D - 6 263 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03529 Vifa-Chr2 1024196295 1024198249 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03529 20 258 14-3-3 family AT5G10450 83.682 2.30e-150 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03529 K06630 - csav:115711270 443.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03529 2 1024196295 1024198249 Vifa2g03529 2 1024196295 1024198249 ECH