Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03467 ATGATTTGCAACTTCCTTTACATCCTTCTCAATCTCGTTCTCTTTTCTTCAATTTTTATTTTTCAGAGCTTGGTGTTAACTCGTCCACCAGAAGTGTGGGTTCTACGAGATCTATACCAGGCCTTGAACTACTCAAATGCGCTCCGTGGATGGAATGGCGGTGATCCTTGCGGAGAGTCTTGGACGGGTGTTACTTGTTCTGGTTCATCAGTTATACGCCTACAGATTCAAGGGTTAAACCTTACTGGGAGTCTATGCAGGCTCTATCTTCTAAGGAATTTGAAGAAGCTTGATGTCAGTTCAAATAACATAGTGGGCGAAATGCCATTTGGTTTACCCCCCAGTGTCACTCATATGAATTTAAGCCACAATTTCTTAATTGGACCTATTGGCGACGTATTTACTGGCTTAGATAATCTCAAAGAAATGGACCTTTCATACAATAATTTTTCGGAAGATCTACCAAGATCATTTGGCTCCCTGACAAACCTTGCTAGATTGTTCTTGCAGAATAACAGATTCACTGGATCAGTCACCTACCTGGCGGAACTTTCACTTACAGATTTGAACATTCAAGATAATCTGTTTAATGGCCTTCTTCCACATCAATTTCAGAATATAAAAAAATTATGGATTGGTGGAAATAAATTCCATGCTACATTGCAATACAAGATGGCATTCAAGACATTTTCATTACAATTTTACAATCATGTTACAAAAGAAATTATAAAAATCCTACACAATACCAAAGCCTAA 756 0.381 MICNFLYILLNLVLFSSIFIFQSLVLTRPPEVWVLRDLYQALNYSNALRGWNGGDPCGESWTGVTCSGSSVIRLQIQGLNLTGSLCRLYLLRNLKKLDVSSNNIVGEMPFGLPPSVTHMNLSHNFLIGPIGDVFTGLDNLKEMDLSYNNFSEDLPRSFGSLTNLARLFLQNNRFTGSVTYLAELSLTDLNIQDNLFNGLLPHQFQNIKKLWIGGNKFHATLQYKMAFKTFSLQFYNHVTKEIIKILHNTKA 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03467 251 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 91 247 - -
Vifa2g03467 251 Pfam Leucine rich repeat 114 174 IPR001611 GO:0005515
Vifa2g03467 251 Pfam Leucine rich repeat N-terminal domain 34 67 IPR013210 -
Vifa2g03467 251 Gene3D Ribonuclease Inhibitor 28 250 IPR032675 -
Vifa2g03467 251 SUPERFAMILY L domain-like 45 219 - -
Vifa2g03467 251 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 115 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03467 Vifa-Chr2 1003498469 1003499224 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03467 10 224 Strubbelig Receptor Gene Family AT5G06820 51.653 1.09e-72 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03467 - - mtr:11428201 330.872