Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03432 ATGGAATGTTCTGAAGATGGTGCCTTAAGGGCTAAAAAGATGGCGGAGAAGAGGTTCTTACAGGATAACTTTGGTGTTGCAAAACTACTTGCAGCAAAGGCTCGGGCCCTGAATCCCAATATTGACGGCATCACTGAACTGCTGGCAACGATTGATGTGTATATAGCTGCTGAAAAAAAAGTTGGTGCAGACGTAAATTGGTACGAGGTCCTTGGTGCACAGCCCTTGGATGATGAGGAAACAATTCGGAAATGTTACAGGCAGAAGGCTCTTACTCTGCATCCGGATAAAAACAAGTCGGTGGGTGCAGACGGTGCATTTAAGCTGGTCTCTCAGGCTTGGACTGTATTATCTGATAAAACTAAGAGAGCCGCCTTTGATCAGAAGTGCCACTTATGGGAGTCCTTCAAAAGAATTAGTGGCAGTATACCTCAGAATAGTTTGTTTGATACTGTTAACCTTGGTGGGAAACCGTCTGAACCTGCTACTCGGGGTGGTTTGTTTAATGCTGCTAACCGGAAGGACAGAGATCTCACGAGGGGAACTCATGCCAATCCTACTCCAAGACCTTCTGTATCTGCTCGTTATAGTAGTTTGTTTAATTCTGCTACCGGGAAGGACATAGATCATACAAGTGCTGCTCACACCAATCCTACTCCAAAAGCCCCCCTTGATGAGCCGACTTCATTTTGGACTGTGTGCAGTTTTTGCAGGACACATTATGAGTACTTCACTGTTTATAAAAACTGCAATATTGTTTGCACCGGCTGCAACAAGCCATTTTTTGCTTCTGAGACACCACCCCCGCCTTTAATTGCAAATGCTTCACCCACTTCAAGAGCTGCTTTGTTGAAGCAGCATAAGTTCAACTCAACCGGATTGGTAAGAAACAACCATGTTTCAAGTAGGACACTGACGTCTTCCGGAACTTCCAGTGGACCGACATCAGTTTCTACCGCTTCTGGAGCTCTTGGTCATTTTAACAGGCCATCTGTGAATTTGAAGAGAAGGCATGAAGATTTGACACCTCTCATGAGTGAGGAGACACATTTAGGGAAAATTCATGTTGAAAGAACCGTTGCAGGTTCAGATTTTCAGCCTTCTTGGAAGAAAAGATGCACAGGTGAACATAAAATTGATAGTGATAGACCAGGCATGGAAACTGAAATGGCATCAAAAAAAGGAATAAGCTCTTCCAATGTGTCTGTGAAGAATAGTTTTGATGCAGGAAAGGTTAGTGCTGCTGGAAATTCCAGACGAAATGGTATTAGGGACATGTCTCAGCAGAATATGAAGAACATCTTGGCAGAAAAGGCCCGGAAGGTGATTTGTAAGAAACTTGATGAGTGGAAGGAGAGTCGTAACAAGCTTGATGAGTGGAAGGCGATTCGTAAAACCCTTGATGAACGGTACCCGTCTTCTACATTAAAGAATACTGGTGCAGAAGTCAACGTGAAGGAGAAAGAAAAGGCTATTAATGGTGTGAAGCCTGGTCCAAAAGAAATTGTTGTTTCTGAGACCAACAACTCTATCTCTGCTGTTTCAGAGGTGCCTCTTTCTGTCACAATGAGTGTTCCAGACCCAGATTTCCATGACTTTGATGGGGACCGAGTTGAGGACACTTTTGGTGAGAACCAAGTGTGGGCTGTATATGATGATGAAGATGGAATGCCACGCTACTATGCCTTTATCCACAGTGTGATCTCAAAAAATCCATTCCAAATGAAGATAACCTGGCTGAGCTCTAAAACCAATGATGAGTTTGCACCTATAAGGTGGGTCGGTTCTGGCTTTCCAAAGACAACCGGAGATCTTCGACTAGGCAAGCGTGTAATCAGCAGCAATCTAAATTCTTTCTCGCACAGGGTTAACTGGACAAAAGGTCCAAAAGGAATTTTTCGTATATATCCAAGGAAAGGGGATGTTTGGGCTCTATATCAAAACTGGTCCCCTGATTGGGATGAACTTACTAAAGATAATGTCATACATCAATACGAAATGGTGGAAGTGCTTGACGACTACAGTGAAGAGCACGGTCTAAATGTTGCTCCACTTTCCAAGGTTGCAGGTTTCAAGACAGTGTTCCGCCAGAATGCTGACCCGAGAAAAATCAGGAACATTCCAAGGGAAGAGATGTTTCGCTTTTCACACCAGGTTCCTTCATACTTGCTTACCGGAGAAGAAGGTGAAAATGCTCCTAAAGGTTTTTTGGAGCTGGATCCTGCTTCTACACCCATGGAACTTCTTCAGCTGATCACTGATCCTCCAAACCAAGAAAAGGAAATGGCAGTTGAAAATTCTTCAAAAGATGACTTGAAGCACAAGGACAATTCTGGCGCGAGAAAGAAGGCGGCTGGAGCACAGGCAGGGAAGGTTTGGCCTGAGAATTTGCTGGTATACAAGCGGAAACGTTTTAAGGTAAAGAAGGATCAGTGA 2436 0.4401 MECSEDGALRAKKMAEKRFLQDNFGVAKLLAAKARALNPNIDGITELLATIDVYIAAEKKVGADVNWYEVLGAQPLDDEETIRKCYRQKALTLHPDKNKSVGADGAFKLVSQAWTVLSDKTKRAAFDQKCHLWESFKRISGSIPQNSLFDTVNLGGKPSEPATRGGLFNAANRKDRDLTRGTHANPTPRPSVSARYSSLFNSATGKDIDHTSAAHTNPTPKAPLDEPTSFWTVCSFCRTHYEYFTVYKNCNIVCTGCNKPFFASETPPPPLIANASPTSRAALLKQHKFNSTGLVRNNHVSSRTLTSSGTSSGPTSVSTASGALGHFNRPSVNLKRRHEDLTPLMSEETHLGKIHVERTVAGSDFQPSWKKRCTGEHKIDSDRPGMETEMASKKGISSSNVSVKNSFDAGKVSAAGNSRRNGIRDMSQQNMKNILAEKARKVICKKLDEWKESRNKLDEWKAIRKTLDERYPSSTLKNTGAEVNVKEKEKAINGVKPGPKEIVVSETNNSISAVSEVPLSVTMSVPDPDFHDFDGDRVEDTFGENQVWAVYDDEDGMPRYYAFIHSVISKNPFQMKITWLSSKTNDEFAPIRWVGSGFPKTTGDLRLGKRVISSNLNSFSHRVNWTKGPKGIFRIYPRKGDVWALYQNWSPDWDELTKDNVIHQYEMVEVLDDYSEEHGLNVAPLSKVAGFKTVFRQNADPRKIRNIPREEMFRFSHQVPSYLLTGEEGENAPKGFLELDPASTPMELLQLITDPPNQEKEMAVENSSKDDLKHKDNSGARKKAAGAQAGKVWPENLLVYKRKRFKVKKDQ 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03432 811 Gene3D DnaJ domain 63 131 IPR036869 -
Vifa2g03432 811 MobiDBLite consensus disorder prediction 757 788 - -
Vifa2g03432 811 PANTHER BNAC03G44070D PROTEIN 1 745 - -
Vifa2g03432 811 MobiDBLite consensus disorder prediction 375 389 - -
Vifa2g03432 811 MobiDBLite consensus disorder prediction 296 330 - -
Vifa2g03432 811 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Vifa2g03432 811 MobiDBLite consensus disorder prediction 296 326 - -
Vifa2g03432 811 Pfam DnaJ domain 66 127 IPR001623 -
Vifa2g03432 811 MobiDBLite consensus disorder prediction 159 194 - -
Vifa2g03432 811 SMART dnaj_3 65 122 IPR001623 -
Vifa2g03432 811 Pfam Domain of unknown function (DUF3444) 522 728 IPR024593 -
Vifa2g03432 811 SUPERFAMILY Chaperone J-domain 43 126 IPR036869 -
Vifa2g03432 811 MobiDBLite consensus disorder prediction 763 781 - -
Vifa2g03432 811 CDD DnaJ 66 119 IPR001623 -
Vifa2g03432 811 MobiDBLite consensus disorder prediction 375 399 - -
Vifa2g03432 811 PRINTS DnaJ domain signature 68 86 IPR001623 -
Vifa2g03432 811 PRINTS DnaJ domain signature 86 101 IPR001623 -
Vifa2g03432 811 PRINTS DnaJ domain signature 102 122 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03432 Vifa-Chr2 990782642 990785077 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03432 15 271 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 29.389 3.05e-18 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03432 - - tpra:123918026 1051.97