Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03381 ATGGCTTCAAAAACCAACAAGGTATCTATTGTTAAACCTTGGACTACTGGAATAAGTGGACAGCTTCAAAAAGCACTTGTGACAGGTGTGCCAAAGCTAAAGAGAATAGATCTTGAAGTAGCATGTGAAGATTTTAGTAATGTAATCGGTAAATCACCGATTGGTACGTTGTACAAAGGAACTTTATCTAGTGGAGTTGAAATTGCTGTAGCTTCTGTTTCTCTGACATTATCCAAGACTTGGACAAAGAATTTAGAAGCTCAGTTTAAGAACAAGATAGACACACTATCAAAAGTGAACCATAGGAATTTTGTCAATCTTATTGGATATTGTGAAGAAGAAGAACCTTTTACCAGAATGTTGGTTTTTGAATATGCGCCAAATGGAACACTATTCGAGCATTTACACGTGAAAGAAGCTGAGCACTTGAACTGGGGACCGAGACTTAGAATTGCGACAGGAATGGCTTACTGCCTATAA 480 0.3771 MASKTNKVSIVKPWTTGISGQLQKALVTGVPKLKRIDLEVACEDFSNVIGKSPIGTLYKGTLSSGVEIAVASVSLTLSKTWTKNLEAQFKNKIDTLSKVNHRNFVNLIGYCEEEEPFTRMLVFEYAPNGTLFEHLHVKEAEHLNWGPRLRIATGMAYCL 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03381 159 Gene3D Transferase(Phosphotransferase) domain 1 29 159 - -
Vifa2g03381 159 PANTHER PROTEIN MALE DISCOVERER 2 4 159 - -
Vifa2g03381 159 ProSiteProfiles Protein kinase domain profile. 43 159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifa2g03381 159 FunFam Inactive receptor-like serine/threonine-protein kinase 17 125 - -
Vifa2g03381 159 Pfam Protein tyrosine and serine/threonine kinase 45 156 IPR001245 GO:0004672|GO:0006468
Vifa2g03381 159 SUPERFAMILY Protein kinase-like (PK-like) 26 159 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03381 Vifa-Chr2 973366137 973366798 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03381 47 156 Trihelix Transcription Factor Family AT5G38560 39.091 1.90e-21 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Vifa2g03381 PK_Tyr_Ser-Thr 2.6e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03381 - - qsu:112019383 271.937