Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03374 ATGCTCATTTCGCAAATGATGACTGGGCTAATTTTAGGACCAATTGTGCCGGTTTTGGAGGAGTATAAGAGAATAGTGTTTCCTTATGGAAGTCAAGATACACTTGCAACAATAACAACACTCGGTTATGTGTTCTTCTTATTTGAAACTGACATAAAAATGGATTTCAACATGATTGTAAATACGGGAAGAAAAGGATGGGTGATTTTCTTTTTCGGGTTAATAGCTCCTATGGTAATTGGTTTTGTTACCCGTCATTTAACGATTAGGAATAATTTTGAAAATAGTTCTCTTGAAGGAGATATAGTAATGGTAGGACACAATACAACATCATTTGCAGTGATTGTTTCTCTTTTGAATGACCTTAAACTTCTAAACTCCGAACTTGGAAGATTAGCATTATTTGTTGCTTTGGTTGGTGACATATTCAGTAACGTTTTTGTAACCATTTCATCTACTATGGTTAATACCAATCATTATATTTCAGTTACCATGAGGCTTGGATATTTATTTGGCATGGTTATCTTCATTTTGTTTATCTACCGTCCTGTCATGTTTTAG 561 0.3405 MLISQMMTGLILGPIVPVLEEYKRIVFPYGSQDTLATITTLGYVFFLFETDIKMDFNMIVNTGRKGWVIFFFGLIAPMVIGFVTRHLTIRNNFENSSLEGDIVMVGHNTTSFAVIVSLLNDLKLLNSELGRLALFVALVGDIFSNVFVTISSTMVNTNHYISVTMRLGYLFGMVIFILFIYRPVMF 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03374 186 Gene3D - 1 186 IPR038770 -
Vifa2g03374 186 PANTHER CATION/H + ANTIPORTER 2 185 - -
Vifa2g03374 186 Pfam Sodium/hydrogen exchanger family 3 181 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03374 Vifa-Chr2 971788955 971789607 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03374 2 144 Antiporter Super Family AT2G13620 29.932 2.82e-15 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03374 K26731 - gmx:100784321 162.54