Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03349 ATGAATTCTATTGTTGAGAGGCAAATTTCCTTTACGGATCCGATTTTCAACAGCGGAATGGCTTTGAACACTCCAATACGCTCCAACAGCACACCTCTCTCCAACTCAATCTTCAAATCTAAACCCGTTTTCTTACATGAATGGTGGCTTGTCAAGCCTCAAAACCAATGCAATGGTTTTGCTCTTGCTGGCATTGCTTCAATGCCGGCAGAAAGAATGTTTGTTTCGTCTGTGATTGTAAAGGTACATGAACCCAATGTTGTAGAGACCCAAGATGGAACCATCTTAGCCTTCCGCTCTTTCATTAACTCCTCTCGTACATTACAAAACGGTTTTTCTTCTGAGGTATGCCAACGTTTCTCAATTGGATTTCCACACGATTGGGAAAAAATTTCCACGCGTTTATCAGTTGATGTTTCAAATACTTCTTCCCACAAAGAAACAACTAATGATACTTCACAGGAAGCTCTGGAAGCTGAAGATAACAAGAAAATTACAAGTCTTAGGTTGTCTCAACCACAAGTTGACGTGATTTATAATGGTGAAAATGGGTTCGCAAATGTTGATGACTCAAATGCTTCTCCCTGCCAAAAAACAGCTGATGAAACTTTGCAGGAAGCAGAAGGTAATGACAATATTGCGAGTCATAAGTTGTCTCATCCGCAAGTTGAGGTGGCTTATAACGGTGAAAATGAAGTCTCAGATTTTGACGACTTGAATGCTTCTTTCTCCAAAAAGACAGCTGACGTGACATCACACGAAGCTAAGGAAGCTGAAGATGACAACAATATCGGGTGTCTTAGGATGTCTGAGCTGGAGGTTGACGCGATTAATACTGGTGAAAATGGAGTTTCAAGTGTTGCTGCAGTTGAAAGTAATCAATCTAAGATGGGTGTGTTTGAATTTGATCTTGACTTGGAGCAAAGCAGTGTCAAGTCTCCACTTCATCCGAAGAAATTGAAGTTATCTAGTGACCGCAAGGAGAATAATAAACGTCTCAAGCAAAAGATTGTAGAGGATCCTGCTAATTCATGTAGAAGGGTGGTGACAAGAAGCATTGCCAAAAATAGTCATATAATGCTTAAAAAGGATAGGAAAGTTGGAGCGAAATGTTTTACTTCTCCTGAAAGAAGATCCTCTAGGGCACCTTTAATACTCTCTTCTTTTTGA 1170 0.4017 MNSIVERQISFTDPIFNSGMALNTPIRSNSTPLSNSIFKSKPVFLHEWWLVKPQNQCNGFALAGIASMPAERMFVSSVIVKVHEPNVVETQDGTILAFRSFINSSRTLQNGFSSEVCQRFSIGFPHDWEKISTRLSVDVSNTSSHKETTNDTSQEALEAEDNKKITSLRLSQPQVDVIYNGENGFANVDDSNASPCQKTADETLQEAEGNDNIASHKLSHPQVEVAYNGENEVSDFDDLNASFSKKTADVTSHEAKEAEDDNNIGCLRMSELEVDAINTGENGVSSVAAVESNQSKMGVFEFDLDLEQSSVKSPLHPKKLKLSSDRKENNKRLKQKIVEDPANSCRRVVTRSIAKNSHIMLKKDRKVGAKCFTSPERRSSRAPLILSSF 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03349 389 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 23 357 - -
Vifa2g03349 389 MobiDBLite consensus disorder prediction 139 158 - -
Vifa2g03349 389 Pfam SANTA (SANT Associated) 43 131 IPR015216 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vifa2g03349 SANTA 5.3e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03349 - - psat:127120758 517.694