Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03330 ATGGATAGGTGGGGTGCTCATCATCGACAGCCATTCATTGGTTGGCATGGGAGAAATGAGAGTTCTTTTCGTGATGTTACTACCAAGGATGAGGAATCAGACAATGACGAAGAAGAAGTCATTATTAAAAATGAGCCTGTCTTTTTTCCTGAATTTAAGAAAAGGAAGCGCCTCAGCCTTAGTCAGCTTAGAGAGGTGAAAGAGGAGTCGTGTGAGAAGCTTAGTCAGCTTAGAGAGGTGAAAGAGGAGTCTTGTGGGAAGATTAGTCAGCTTAGAGAGGTGAAAGAAGAGTATTATGGGATGGAAAGCAGTAGCAAGAATAAGAGAAAGAAGCATGATAATAAGGAAAGATGGTCAAGCGAGAGGTACAAGTTGGCTGAGCAAAGCATGTGGGAGGTGTTGAAGGCAGAGGGCGCGACTTTTGAAAGCCCAATAACCCGATCTGCACTAAGATTGTCTGCGCGTAAATTCATTGGTGATACTGGACTTCTAGACCATTTGTTGAAGCACATTGATGGTAAAGTGGCACCTGGAGGGACTGATCGGTTCCGAAGATGGTTCAACACCGACGGAGTCATGGAGTATTGGTTGGAGAGTGCTGATTTGGATGGTGTCCGGCAGGAGGCTGGGGTACATGACCCCTACTGGATACCTCCATCCTCTGTTAGGGCAACCCCTGCCCCTTGCCAGAATTCTGATTCTTCCGATGAGTTGAAACAACTTAAATTGGAAATGGCCCAAATGAAGAAAGATATGCAGGAGCTTGTTGCCGAGAAGAAAAAGAAAAATGAAAGTAACATGATGAAGGAGACTTTCAAAGAACTTGTAAAGTGGAAAGCTATAACTGACCATCGCCTAACTGAAATCATGGCTTCTTTGAAGAATTTGCAGGGCAAGCATGGTGAAATGGTGACTTGGAAAACTGAAGTGGAGCAACATCTTATGGACATAACAAATAAATTGAATGAACTTCAAGCACCAAGAGAATGCACTACTTTTAGCCCTCCTTCAGAGAAATGGAAAGATTGGTTAGAAGCCACTAACCCATGCAATACTCAGGAGGATGCATTGGCAACTTGGATCGGGAGCTCAGAGCTACTTAATGTTCCACAAGAGTGTTTACTTGAATATCCCTACACAGGCATGCCAACTCAGCCATTCAATGAAGAACCCACTAACAATAAGAGTGATGCGGAGGAGCTAATGCCCACAATGCAAGATGATCAACCCAATGTCACCCCAGATTCTTCTACAACAGTTAATTCAAAGGCTGACATCGACAACTCATTGATAATGTTTCAGGAGATGTTTATGGATTTATTCAAATGGAAAGAAAAAATGGAGCAGCAGCTGCTGGATGTATCAAACACTGTATATGGCATGCTAGCGATGAAGTAG 1398 0.4342 MDRWGAHHRQPFIGWHGRNESSFRDVTTKDEESDNDEEEVIIKNEPVFFPEFKKRKRLSLSQLREVKEESCEKLSQLREVKEESCGKISQLREVKEEYYGMESSSKNKRKKHDNKERWSSERYKLAEQSMWEVLKAEGATFESPITRSALRLSARKFIGDTGLLDHLLKHIDGKVAPGGTDRFRRWFNTDGVMEYWLESADLDGVRQEAGVHDPYWIPPSSVRATPAPCQNSDSSDELKQLKLEMAQMKKDMQELVAEKKKKNESNMMKETFKELVKWKAITDHRLTEIMASLKNLQGKHGEMVTWKTEVEQHLMDITNKLNELQAPRECTTFSPPSEKWKDWLEATNPCNTQEDALATWIGSSELLNVPQECLLEYPYTGMPTQPFNEEPTNNKSDAEELMPTMQDDQPNVTPDSSTTVNSKADIDNSLIMFQEMFMDLFKWKEKMEQQLLDVSNTVYGMLAMK 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03330 465 Coils Coil 231 265 - -
Vifa2g03330 465 MobiDBLite consensus disorder prediction 16 37 - -
Vifa2g03330 465 Coils Coil 60 80 - -
Vifa2g03330 465 PANTHER PROTEIN DYAD 1 463 IPR044221 GO:0007131|GO:0051177|GO:0051321
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03330 Vifa-Chr2 957064741 957066755 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03330 103 198 PHD Transcription Factor Family AT5G22260 37.755 2.33e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03330 - - gmx:100806484 646.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03330 2 957064741 957066755 Vifa2g03330 2 957064741 957066755 ECH