Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03327 ATGGCTTCTTCTTCTCGCTCATACCAAACTCATCTTAAAAACACACAACAAGATTTCAATTTTTTCAAAGATGAAAAATCATCAAAACCTCTTCAAGATGAAGAAGAACGAGAAGAAGATTGGCTAAAGCTAGGGTTAGGTTTAGGAACTAGCACATCATCATCATTATCACCATGGAAGAAAATAGTAAGTCATAATCCAATTTTAATTTCTCCATCATCGTTATCATCTACTACTTCACAACAACAATGCTTCCCTCAAATAGGATTAGGGTTAGGGTTTGAAGATCATGGTTTAGGTTTAGAATCAAGAAAAGGTAAAGAGAGATTGGAAGACTTGAATTTCTCTAATGACCATCAGTACCATCATGATGATGATAATAGTAAGGTTATAGGGTTATCATCATTATCATTATCATCATCATGTGAAATCATGAATCCTCGTGGTGAAGATTTGGCTTTCAAGTTTCCTAGTGATTCTCATCATTACTTAGCCAGAAATATTCACAACCAATCTGGTTTCTGGTTTACCCTACGCTCCTTTACCAACCGGAATGGTGAAGCTTTACCTCAAATATCAAAGGAATACATAAGAGTAAAGGATGAAAACATGACGGTGTTGATGGTTAAAAAGTATCTGGTTACAAAACTAGGTCTCTCCAATGAAGATGAGATTGACATCTCTTGCATGGGAGAAAGCTTGTCGCATGTCCAAACATTGAAGCAAGTAAGAGACACTATTTGGCTCCCAAGATTGGTTGAATATGTAGATTCAACTACTTTGTCACTTGGAGATTTCCGTGAAGTGACCATGAACCATTTGATGTCACTAATTTACCAAAAACATGATAAATTGAATTGA 861 0.3566 MASSSRSYQTHLKNTQQDFNFFKDEKSSKPLQDEEEREEDWLKLGLGLGTSTSSSLSPWKKIVSHNPILISPSSLSSTTSQQQCFPQIGLGLGFEDHGLGLESRKGKERLEDLNFSNDHQYHHDDDNSKVIGLSSLSLSSSCEIMNPRGEDLAFKFPSDSHHYLARNIHNQSGFWFTLRSFTNRNGEALPQISKEYIRVKDENMTVLMVKKYLVTKLGLSNEDEIDISCMGESLSHVQTLKQVRDTIWLPRLVEYVDSTTLSLGDFREVTMNHLMSLIYQKHDKLN 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03327 286 Gene3D - 112 255 - -
Vifa2g03327 286 MobiDBLite consensus disorder prediction 18 38 - -
Vifa2g03327 286 MobiDBLite consensus disorder prediction 1 17 - -
Vifa2g03327 286 MobiDBLite consensus disorder prediction 1 38 - -
Vifa2g03327 286 PANTHER RING FINGER PROTEIN 1 282 IPR044171 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03327 Vifa-Chr2 955359056 955363518 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03327 184 245 C3H Transcription Factor Family AT3G23060 47.619 1.18e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03327 - - psat:127078780 476.478