Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03312 ATGTCAAGCGAAAGGAAAAGTCAAGACACAGTCATAAATCGTTATCTCTCTCGAGTTCCACCCCAAAACAACGACATCATGGAATTCATTGAGGCTCGTCGTAAAGCTAACGTGTGTGAGATCAATACTCAGTTTACTAAAATCAATAACACACTAGACATTAAAAAGAAACTTGGTGATGAACTAAGCCATTTGCACAAAGAGTTTGAGGCTCAATTTTGGTGGACTTGTTCAATTGATAAGATGAATTGGGCTCAACTTGAAATGTTAAAGAAGGCTTTGGAGGAGCTTAGGAACCTTGTTGCACAACATGATATTAACCTTGTAATTCAGGATACTCATACTCAAACTCTTCCATTTTGTGTTGAAAGTGTTTCACCATCTAACATCCTTTTCCAACACCAATTAATTCCTCAACAAGGTCAAATGTTTCCACCACAATTTTATCAGAAACATTTTTTGTATCCTTAA 471 0.3631 MSSERKSQDTVINRYLSRVPPQNNDIMEFIEARRKANVCEINTQFTKINNTLDIKKKLGDELSHLHKEFEAQFWWTCSIDKMNWAQLEMLKKALEELRNLVAQHDINLVIQDTHTQTLPFCVESVSPSNILFQHQLIPQQGQMFPPQFYQKHFLYP 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03312 156 Coils Coil 87 107 - -
Vifa2g03312 156 Gene3D - 25 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03312 Vifa-Chr2 950533669 950534322 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03312 9 102 Type I MADS-box Gene Family AT5G60440 30.928 9.56e-10 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03312 - - mtr:11438274 149.828