Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03307 ATGCCAAGCAGAAGGAAAAAATTCATTAAGGCTCGTCGTAAAGCTAATGCGTGTGAGATCAATACTCGGTTGACTCAAATCAATAACACACTATACATTGAAAAGAAATTTGGTGATGAACTAAGCCATTTGCGCAAAGAGTTTGAGGCTCAGTTTTGGTGGACTTGTTCAATTGATAGGATGAATTGGGCTCAACTTGAAATGTTCAAGAAGGCTTTGGAGAAGCTTAGAAACCTTTTTGAACAGCATGTTAATAACCTTGTAATTCAGAATACTCATACTCAAACTCTTCCATTTTGTGTTGACAATGTTTCACCATCTAACATCCCTTTCCAAAACCAATTAATTCCACAACAAGGTCAAATATTTTCACCATAA 378 0.3598 MPSRRKKFIKARRKANACEINTRLTQINNTLYIEKKFGDELSHLRKEFEAQFWWTCSIDRMNWAQLEMFKKALEKLRNLFEQHVNNLVIQNTHTQTLPFCVDNVSPSNIPFQNQLIPQQGQIFSP 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03307 125 Coils Coil 66 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03307 Vifa-Chr2 949797478 949798101 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03307 15 77 Type I MADS-box Gene Family AT2G24840 39.394 9.46e-08 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03307 - K06958 mtr:11438274 116.316