Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03283 ATGCAGGAAGATAAGAAAATGAAAGTGAAGAAAGGATGGCTGGCAGTTCAAGTAGGTTTAGAGGAAGAAGAAGAAGGCGGTTCATCTTCTCAGAAATTCCTCATACCTATCTCTTATCTTTACCATCCACTTTTCAAGACTCTTCTCGATGAAGCTTACGATGTTTATGGCTACCACACCAATGGTCCTCTCAAACTTCCCTGTTCTGTTGATGATTTTCTTCATCTTCGTTGGCGAATCGAGAAAGAATCGAGTCATAGTAATCAGCATAGCGTTAACCATCATCAGCATCGTCTTCCTCATGCTCTGATTTTTCACTCTTGTTGA 327 0.4067 MQEDKKMKVKKGWLAVQVGLEEEEEGGSSSQKFLIPISYLYHPLFKTLLDEAYDVYGYHTNGPLKLPCSVDDFLHLRWRIEKESSHSNQHSVNHHQHRLPHALIFHSC 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03283 108 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 5 76 IPR003676 GO:0009733
Vifa2g03283 108 Pfam Auxin responsive protein 6 79 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03283 Vifa-Chr2 944213207 944213533 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03283 9 81 Calmodulin-binding Proteins AT3G43120 42.466 4.91e-12 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03283 K14488 - mtr:25489869 202.986