Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03252 ATGAATACTCTGATCAAACAAAGCAAAACAACTAAAAACCAAGATGGAGGTGATCCGTGTATTGTGTTAGAAAGTAATGTAGTAGATCAACATTTGGTCAATAACAATATAAGTGAAGATGTCGAGCACAGCAAGAAGAAAAAGAAGAAGAAACGGAGTGAAGTAAGCAAACATAACGAGTTCAAAAGCGCTCGATGTGAAGATGGTGATGACGGAAAGAAAATGAAAAAGAAGCCGAGACTAATTCAAGGAAACATGTTTAACGAGTGTAATGATTGTAGAAGCAATGAAGGTGAAGATGGAGAGCAGGGCAAGAAGTTAAAGAAAAAGCAGAAGAAATTGAGTGAAGAAAGCAAACATAAGGATTATAATGAGGTCAAAAGCAATGAAGACGGAGACAGTGATCAAGGAAAGACAACGAAGAAGAATCAACTTACCAACAAGAAAAGTAAACCCAAACGGGTAACTTTTTCTGAGCAAGTGGAGGAGTTTTGTTGTGATGGCTTAGTGCGTGGGAAAAGGTATACACCAGAAGAAGATGAGAAGATCAGAGCATCTGTTCATGACTTTATAAAATTTCATGGTTTGGGAGATGAAGGGGTAGATATGATTCTTCATTCCCAGAAACACTCTTCAATTAGAGGCTGTTGGAAAGTTATTGCAGAAGTCCTACCTGAGAGGCCTATGGAGAGTGTGATTCGTCGTGCTCGTAGGTTGTTTGAAACCAATGAGAGGTTTAAGTGGACACCTTATGAGATTGACTTTATACGGAAAGCGCACGAGCAAAACGGACCTAATTGGAGGGCAGTAGCTGACACTTTGGGTAAAAGTCGATATCAAATAGCAGATGCTTGGCACAAGTTAAAATTTACAAAAAGAAAGAAAGGACAGTGGTCCCAAGAGGAATATCAAACTTTATTTAATTTAGTAAACATTGATCTGCGCATGCGGGCTTTAGAGCCTTATAGAAAATCTAAACATGGTATGTTGCGAGATAATATTTGTTGGGAGGCAATTGGTCACAAGTTAGAAACCCGAAACAGCGCAGTTTGCTGCAGTAAGTGGTAA 1068 0.3895 MNTLIKQSKTTKNQDGGDPCIVLESNVVDQHLVNNNISEDVEHSKKKKKKKRSEVSKHNEFKSARCEDGDDGKKMKKKPRLIQGNMFNECNDCRSNEGEDGEQGKKLKKKQKKLSEESKHKDYNEVKSNEDGDSDQGKTTKKNQLTNKKSKPKRVTFSEQVEEFCCDGLVRGKRYTPEEDEKIRASVHDFIKFHGLGDEGVDMILHSQKHSSIRGCWKVIAEVLPERPMESVIRRARRLFETNERFKWTPYEIDFIRKAHEQNGPNWRAVADTLGKSRYQIADAWHKLKFTKRKKGQWSQEEYQTLFNLVNIDLRMRALEPYRKSKHGMLRDNICWEAIGHKLETRNSAVCCSKW 355
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03252 355 Pfam Myb-like DNA-binding domain 248 306 - -
Vifa2g03252 355 Gene3D - 237 288 - -
Vifa2g03252 355 Gene3D - 289 355 - -
Vifa2g03252 355 MobiDBLite consensus disorder prediction 56 78 - -
Vifa2g03252 355 MobiDBLite consensus disorder prediction 33 154 - -
Vifa2g03252 355 ProSiteProfiles Myb-like domain profile. 290 355 IPR001005 -
Vifa2g03252 355 SUPERFAMILY Homeodomain-like 247 306 IPR009057 -
Vifa2g03252 355 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 247 293 IPR017930 -
Vifa2g03252 355 MobiDBLite consensus disorder prediction 93 138 - -
Vifa2g03252 355 PANTHER GB|AAC33480.1 16 355 - -
Vifa2g03252 355 CDD SANT 174 240 IPR001005 -
Vifa2g03252 355 SMART sant 244 291 IPR001005 -
Vifa2g03252 355 SMART sant 171 242 IPR001005 -
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vifa2g03252 Myb_DNA-bind_6 2.8e-08 CL0123
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03252 - - mtr:112416380 317.005