Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03206 ATGCCTGACGGGCCTCCAAAGCTCGTGATAACAGGATTCGGTTCTTCTAACAAAGACAACAACAATGTGAAACTTCATACTAGCATGAGTTTGCTTGTGAAGGAAGCAATCTCATTGGGAATAGTCCTTGAGTTCCGCATTATATCGGAACCTGCCACTCCTTCTTCTCTTACAATGGAGAACCTCAAGTTGGTAGAAGGTGAGGCTTTAGTTTTTAATAGCATCTTAAAATTGCACAAATATGTGAAAGAAAGTAGAGGTTTTCTAAAGGCAATTCTGCAATCAATGAAGAAGTTAAATCCAATTGCAGTGACAGTTGTTGAGCAAGACACAAACCACAATGGGCCATTCTTCGTTGGTAGGTTTTTGGAATCACTTCACTATTACTCGGCAGTATTTGATTCTCTTGAGGCAAGTATGGCAAGAAATAGTCGAATTAGGATGAAAATAGAGAGAGTACACTTTGCAGAAGAAATTTGTAATGTTGTTGGTTATGAGGGTCCTGATAGAATGGAGAGACATGAAGAGTAG 531 0.3936 MPDGPPKLVITGFGSSNKDNNNVKLHTSMSLLVKEAISLGIVLEFRIISEPATPSSLTMENLKLVEGEALVFNSILKLHKYVKESRGFLKAILQSMKKLNPIAVTVVEQDTNHNGPFFVGRFLESLHYYSAVFDSLEASMARNSRIRMKIERVHFAEEICNVVGYEGPDRMERHEE 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03206 176 ProSiteProfiles GRAS family profile. 1 176 IPR005202 -
Vifa2g03206 176 Pfam GRAS domain family 2 175 IPR005202 -
Vifa2g03206 176 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 4 175 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03206 Vifa-Chr2 920564475 920565005 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03206 4 175 GRAS Transcription Factor Family AT2G01570 40.462 3.90e-34 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vifa2g03206 GRAS 9e-45 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03206 - - mtr:25502341 276.944