Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03204 ATGGAACAAGACTTCAACGTGTGGCTTTCTTTTTGTATGAATCAAAGTGTCAATCATGATTTCCCCATCAGAAGGTTTTGTCCTGCAAGAATGGAGCAAGAGATAGTGCTCGATGATAATGAATTGTGTACTTTTGATGCCACCACCACTTCTTGTCTATTAGCTTCTTCAGAACTTGATGCCTTTGTTGATAGCTTCATCGACATGGATCAGTATGAAGATAGTGAGTCTCAAGAAAAGAACCATCATCAAAGTTTTGACCATTTTCTGGTCAATGAAGAAAATAATATCAATGCATACTCCATGGAGGTGAATGATGTTATTGGATATGTTCCAACAACAATCACAGATCACGTTATTCAAAAGTGTGTGCCTTGTCAAGAACAAATCAGTTTTCAAATGGACCAAGGCCTTGACTTGGTCCATACTTTACTGGCTTGTGCCGAAGCGGTTGGTTGCAGAGACAACCATCAAGCAAATTTATTACTTAGTAAGCTTATGTCTCTGGCAAATCCATCAGGAGATTCATTGCAAAGAGTGTCTTACTTTTTTGCCAAAGGATTGAAGTGGAGAATAAGTTGGAAGCTTTTCAGCTTCTTTACCAAACAACACCATATATTACTTTTTGTTTCATGGCTGCAAATGAAGCTATATGTCAAGCATCAAAAGGAAAAAGCTCAATTCACATTATTGATCTAG 699 0.3763 MEQDFNVWLSFCMNQSVNHDFPIRRFCPARMEQEIVLDDNELCTFDATTTSCLLASSELDAFVDSFIDMDQYEDSESQEKNHHQSFDHFLVNEENNINAYSMEVNDVIGYVPTTITDHVIQKCVPCQEQISFQMDQGLDLVHTLLACAEAVGCRDNHQANLLLSKLMSLANPSGDSLQRVSYFFAKGLKWRISWKLFSFFTKQHHILLFVSWLQMKLYVKHQKEKAQFTLLI 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03204 232 ProSiteProfiles GRAS family profile. 131 232 IPR005202 -
Vifa2g03204 232 Pfam GRAS domain family 140 194 IPR005202 -
Vifa2g03204 232 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 85 214 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03204 Vifa-Chr2 920563645 920564425 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03204 135 194 GRAS Transcription Factor Family AT1G50420 41.935 3.68e-08 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vifa2g03204 GRAS 5.5e-09 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03204 - - mtr:25502341 229.95