Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03202 ATGGGAGATAAAGGAAACAAAACAGATGCATATATAGTGTGTTATGCACCAACCATGATTACAACAAATGGAATATGGCAAGGAGATAACCCTTTGGATTATTCTCTTCCACTTTTCATCTTGCAATTAACTTTAGTTGTTGCAGCCACTCGCATGTTCGTCTTTATTCTCAAGCCCTTTCGCCAGCCACGTGTCATAGCTGAAATTCTGGGAGGAGTAATATTAGGTCCTTCGGTGCTTGGAAAAAACGAACTATTTGCCAATGCAATTTTCCCTCTAAGAAGTGTGATGGTCATTGAAACAATGGCGAACGTTGGATTACTTTATTTCCTCTTCTTGGTTGGTGTGGAGATGGATGTGACTATTTTGCGCAGCGTAGGGAGAAAGGCGGTCTTTGCAGCAATTTCTGGCATGGTTTTGCCTTTCATCATTGGTGCTTCTTTTTCCTTCTTTTCGAATAAGCACACTCACGATAACATAAACCAAGGAACTTATATTCTGTTCCTCGGCGTCGCTCTATCTGTCACTGCTTTTCCTGTCTTAGCTCGAATCCTGGCCGAGCTAAAACTTATTAACACGGATTTAGGAAGGCTCGCTCTTTCGTCTGCACTCATTAACGACGTGTGCGCTTGGATTCTCTTGGCTTTAGCAATTGCATTGGCTGAAAATGAAACAAGTTCTTTTGCTTCCCTTTGGGTTTTATTGTCGGGCGCAGCATTTGTCGCCTTTTGTATCTACGCCGTTCGACCAGCAGCCTCATGGGTAGTTAGGAAAACACCTGAAGGTGAATCATTCAGTGAATTCTATATATCTCTTATATTAGCCGGTGTCATGATCTCCGGTTTCATCACAGATGCTATTGGAACACATTCTGTTTTCGGAGCTTTCGTGTTTGGTTTGGCGATTCCGAGTGGACCACTTGGTGTTACTCTTGTGGAAAAGCTTGAGGATTTTGTTTCCGGACTTTTGCTCCCTCTATTTTTCGCAATCAGCGGGTTAAAAACCGATTTAGGACTCCTTCAAGGGTCTTGGACTTGGAGTATTCTTATTATTGTCATTTTTCTTGCTTGCATCGGCAAAGTTGTGGGAACTCTAGCTGTTGCATTCTTTTATCAAATGCCGATCCGCGAAGGCGCTACCCTCGGATTACTCATGAACACAAAAGGCCTTATTGAACTGATTGTTCTCAATGTTGGAAAAGACCAAAAGATTTTCGATGAAGCATCATTTGCCGTAATGGTGGTTATAACCGTAATAATGACCGGAATAGTTGTACCTGCTGTATCGGTAATTTATAGACCACCAAGGGGAAACATACATTACAAAAGAAGATCAATTCAGATATCAAAACCAGATGCAGAATTTAGAATACTAGTTTGTGTCCATAGTCCTCGAAATGTGCCAACGATGATCAACCTCCTTGAAGCCTCGAATCCAACAAAGAAGTCGCCAATATGCCTCTACATGCTTCATTTGGTCGAACTCAGTGGCCGTACATCAGCAATGCTTATTGCCCACAACACAACAAAACCAGAACAGGTAGCACTTAACCGAACGGAAGCTCAATCCGATCACATAATCACCGCCTTTAAAAACTACCAACAAAACTCATCATTCGTCTCTGTCCTGCCTTTAACAGCAGTTTCCCCTTACTCAACAATGCATGAGGATATATGCAATTTAGCACAAGAAAAACGTGTATCGCTAATAATCATTCCGTTTCATAAACAACTAACAGTTGACGGTGGAATGGAACCAACAAACATGTCGTTTCGTACAATCAACCAAAACGTACTAACAAATGCACCTTGCTCGGTCGGAATTCTAGTCGACAGAGGCTTAAACGGTTTAAACCATCTAGACTCAAATCAAGTATCACATCATGTAGCAGTAATGTTTATCGGTGGACCGGACGACAGAGAAGCGTTATGCTACGGATGGAGAATGTTCGAACACACCAGCATAAGCCTAACCATAATGCGGTTTGTCCCGGGCGAAAAACTAAACGAACCGCTTCGTCAACACAGAATCAATCCAGACGAACCAAGCGTGTTAACAGTTGAAACAGATAACGATATAGAAAAACGAATCGATGAGAAACTAATACACGACTTTAGAATGAGATACACGGGCGATGATTCATTTAACTACTTTGAGAAAGTAGTTAACAATGGAGAGGAAACAGTAGCAGCAATAAGAACAATGCACGATATACATGATCTATTTATAGTTGGAAGAGGTCAAGGAATGATATCACCATTGACAGCAGGGTTAACTGATTGGAGTGAGTGTCCTGAGATGGGTGCAATAGGTGATCTATTAGCTTCATCAGATTTTGCAGAAACTGCTTCAGTTTTGGTAGTGCAACAATATGTTGGAATAGGATCAAATTTTGATGGATTAGATACACCAGTTGATAGTGAAGAATATAATAATAGTGTTGACATAAATCATCAATCTGGAACATCAAGAGCACATACTGTTTTTAATACAGAAAGAATAACTCCGCATAATTTATAG 2520 0.4091 MGDKGNKTDAYIVCYAPTMITTNGIWQGDNPLDYSLPLFILQLTLVVAATRMFVFILKPFRQPRVIAEILGGVILGPSVLGKNELFANAIFPLRSVMVIETMANVGLLYFLFLVGVEMDVTILRSVGRKAVFAAISGMVLPFIIGASFSFFSNKHTHDNINQGTYILFLGVALSVTAFPVLARILAELKLINTDLGRLALSSALINDVCAWILLALAIALAENETSSFASLWVLLSGAAFVAFCIYAVRPAASWVVRKTPEGESFSEFYISLILAGVMISGFITDAIGTHSVFGAFVFGLAIPSGPLGVTLVEKLEDFVSGLLLPLFFAISGLKTDLGLLQGSWTWSILIIVIFLACIGKVVGTLAVAFFYQMPIREGATLGLLMNTKGLIELIVLNVGKDQKIFDEASFAVMVVITVIMTGIVVPAVSVIYRPPRGNIHYKRRSIQISKPDAEFRILVCVHSPRNVPTMINLLEASNPTKKSPICLYMLHLVELSGRTSAMLIAHNTTKPEQVALNRTEAQSDHIITAFKNYQQNSSFVSVLPLTAVSPYSTMHEDICNLAQEKRVSLIIIPFHKQLTVDGGMEPTNMSFRTINQNVLTNAPCSVGILVDRGLNGLNHLDSNQVSHHVAVMFIGGPDDREALCYGWRMFEHTSISLTIMRFVPGEKLNEPLRQHRINPDEPSVLTVETDNDIEKRIDEKLIHDFRMRYTGDDSFNYFEKVVNNGEETVAAIRTMHDIHDLFIVGRGQGMISPLTAGLTDWSECPEMGAIGDLLASSDFAETASVLVVQQYVGIGSNFDGLDTPVDSEEYNNSVDINHQSGTSRAHTVFNTERITPHNL 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03202 839 PANTHER CATION/H + ANTIPORTER 13 791 - -
Vifa2g03202 839 Gene3D - 38 435 IPR038770 -
Vifa2g03202 839 Pfam Sodium/hydrogen exchanger family 46 426 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vifa2g03202 839 FunFam Cation/H(+) antiporter 15 38 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03202 Vifa-Chr2 920043029 920045716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03202 8 809 Antiporter Super Family AT2G13620 67.702 0.0 1100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03202 K26731 - gmx:100818927 1267.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03202 2 920043029 920045716 Vifa2g03202 2 920043029 920045716 ECH