Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03141 ATGGCTGCAATGAACTCAAGTGTATTGGCTTGTAGCTACGCCTTATCTGGTTCTGACCTCAACGCAAAGCTCATTTCCATGCCTTCTGTTGCATCACCAGTCGGAGTCTCAGGTTCCAAGTTGCCATCCATCAAGGCCCAGCAAGCCAGAATCCCCAAAGCCAAACAATCAGAAGGAAGGAGAAACGCTCTTGCCTTATTAGCAGCTACTCTTTTTACCACTGCTGTTTCTGCCTCCAATTCTTCTGCTAGTGCTAGTGTATTTGATGAATATCTTGAAAAGAGCAAGGCTAACAAGGAATTGAATGACAAGAAAAGGTTAGCCACTAGTGGAGCAAATTTTGCAAGAGCATATACAGTGCAATTTGGTACATGCAAGTTCCCTGAGAATTTCACTGGTTGCCAAGATCTTGCTAAACAGAAGAAAGTACCATTCATTTCTGAAGATTTAGAACTTGAATGCGAAGGAAAAGACAAATTCAAGTGTGGTTCTAATGTTTTCTGGAAATGGTGA 513 0.4211 MAAMNSSVLACSYALSGSDLNAKLISMPSVASPVGVSGSKLPSIKAQQARIPKAKQSEGRRNALALLAATLFTTAVSASNSSASASVFDEYLEKSKANKELNDKKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPFISEDLELECEGKDKFKCGSNVFWKW 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03141 170 Gene3D - 86 170 IPR044907 -
Vifa2g03141 170 Pfam Photosystem I reaction centre subunit N (PSAN or PSI-N) 42 170 IPR008796 GO:0009522|GO:0015979
Vifa2g03141 170 FunFam Photosystem I reaction center subunit N 86 170 - -
Vifa2g03141 170 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC 1 170 IPR008796 GO:0009522|GO:0015979
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03141 1 141 Calmodulin-binding Proteins AT5G64040 64.626 2.60e-55 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03141 K02701 - tcc:18611871 250.751