Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03133 ATGGGTGAACAATTATTTCCATATTTTGCAATGTTTTTGATACAATTAATATATTCTGGTATGACTTTGCTATCTAAATCCGTGTTCAATGGAGGAATGAAAACATGTGTGTTTGTCTTCTATAGACAATTTGTTGGAGCCATTATCATGGTTGCTTTGTCTTTGATATTTGGACGAAAACAGGCAGTGCCAGTGACGTTCTCGTTTATGACTATCTTCAAGATTTTCATGCTTTCATTATTGGGACTTACTTTAGCTTTGAATGTTCATGGTATTGCTCTTGCTTATACTTCTGCTATGTTGGCTGCTGCAATAGTTAACTGTCTTCCAGCTTCTACATTCTTCTTCGCCGTTCTGCTAAGAGTAGAGAAAGTAAATTTAAGGACAAAATCTGGAATTGTGAAGATAGGAAGTGTATTATTGTGCATGGGTGGTGTATCAATATTGGCATTTTACAAGGGACCCCAATTGCATCATCATCGCAACGATCGACAACATAAGAATCATTTTTCATATAATAATAAATGGGTCTTGGGTTCTTTACTCTTGTTCTTATCCACCATCATGTGGAGCTTGTGGCTTGTACTTCAGTCTCAGTTGTTGAAAAGTTACCCTTCAAAGCTAACATTCATGAGCATTCAGAGTGTATCAAGTGCAATTCAGTCATTTGGCATTGCCATTGCTTTTGAAAGAGATATTGAACAATGGAAGTTAGGTTGGAACATGAGACTATTAGCTGTTGTTTATTGTGGGATACTAGTGACTGCAGTTGCCTACTATTTGCAAGCTTTGGTGATTGAGAAGAAAGGACCAGTTTTTCCAGCAACTTGGAACCCACTTAGTTTTATTATTGCCACAATTGGTTCTGTGATACTATTGGAAGAGCCACTATATTTAGGAAGTGTTTTGGGTGGAATTTTGCTGGTTTTAAGTTTGTACACTGTTTTGTGGGCAAAAAGCAAAGAAGGGATCACTGAAAATCACAATTCTTTACCTATTCAACCATACAAAGAATGTGCAGAAATAAAAACAGAGGTCCCATGTAGCAAACCACCCCAATGA 1062 0.3701 MGEQLFPYFAMFLIQLIYSGMTLLSKSVFNGGMKTCVFVFYRQFVGAIIMVALSLIFGRKQAVPVTFSFMTIFKIFMLSLLGLTLALNVHGIALAYTSAMLAAAIVNCLPASTFFFAVLLRVEKVNLRTKSGIVKIGSVLLCMGGVSILAFYKGPQLHHHRNDRQHKNHFSYNNKWVLGSLLLFLSTIMWSLWLVLQSQLLKSYPSKLTFMSIQSVSSAIQSFGIAIAFERDIEQWKLGWNMRLLAVVYCGILVTAVAYYLQALVIEKKGPVFPATWNPLSFIIATIGSVILLEEPLYLGSVLGGILLVLSLYTVLWAKSKEGITENHNSLPIQPYKECAEIKTEVPCSKPPQ 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03133 353 Pfam EamA-like transporter family 178 316 IPR000620 GO:0016020
Vifa2g03133 353 Pfam EamA-like transporter family 6 136 IPR000620 GO:0016020
Vifa2g03133 353 SUPERFAMILY Multidrug resistance efflux transporter EmrE 240 320 - -
Vifa2g03133 353 SUPERFAMILY Multidrug resistance efflux transporter EmrE 41 150 - -
Vifa2g03133 353 PANTHER WAT1-RELATED PROTEIN 7 323 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03133 Vifa-Chr2 900859987 900864152 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03133 7 250 Nodulin-like Gene Family AT5G64700 51.362 8.18e-75 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03133 - - vun:114162763 429.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03133 2 900859987 900864152 Vifa2g03133 2 900859987 900864152 ECH
Vifa2g03133 2 900859987 900864152 Vifa2g03133 2 900859987 900864152 PCT