Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03132 ATGAACCATCTTCTCCGAAATAATCTTCTCTTTTTCACTTCCTCACGTTCATCATCGCAATCTCGCACGCTTCTCGTTCGGTTTCAACTATGTGAGTTCTCATCTTCTCATACTCCCTATTCCCACTGGAAGCGTCACGACGATGAATCCCGCAATGTTAGGGTTTCGGTGTGGTGGGATTTCGAGAACTGCAACGTGCCTGCTGGTGTTAACGTTTCCAAAGTAGCACCTGCTATCACTGGCGCTGTTAGAGCTAATGGAATTAAAGGTCCCGTTCATATTACCGCTTTCGGCGATGTTTATCAGATTTCAAGGCCTAATCAGGAAGCACTTGCTTTCACTGGGATTCATCTTACTCACATTCCAAACGGTTCGTTTCAGTTCCTCTCTTATTTGGAATAA 402 0.4478 MNHLLRNNLLFFTSSRSSSQSRTLLVRFQLCEFSSSHTPYSHWKRHDDESRNVRVSVWWDFENCNVPAGVNVSKVAPAITGAVRANGIKGPVHITAFGDVYQISRPNQEALAFTGIHLTHIPNGSFQFLSYLE 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03132 133 CDD PIN_limkain_b1_N_like 54 125 - -
Vifa2g03132 133 PANTHER LIMKAIN B LKAP 38 121 IPR024768 GO:0005777|GO:0010468
Vifa2g03132 133 Pfam NYN domain 54 123 IPR021139 GO:0004540
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03132 54 124 C2H2 Transcription Factor Family AT5G61190 42.254 4.78e-14 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03132 - - tpra:123916554 208.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03132 2 899879695 899880096 Vifa2g03132 2 899879695 899880096 ECH